BICLUSTER_ID : DNREG-408
PATHOGENS /2/ : pseudomonas aeruginosa,helicobacter pylori
TARGETS /40/ : NDUFA3, ANXA2, GPX1, ATOX1, SDHA, PSMB1, CANX, CTNNB1, NDUFS1, NDUFA7, NDUFA8, UQCRC1, S100A6, NDUFA6, PSMB5, NDUFS6, PIK3R1, NDUFS2, PPIB, NDUFB2, NDUFC1, FN1, NDUFS5, CAD, MTAP, MTHFD1, PPIA, CCND1, RAC1, NDUFA2, CYB5A, PSMB2, ARF4, OAZ1, SLC25A5, CYP51A1, CALM1, NDUFA4, NDUFB6, PSAP
Gene SetLeading Edge Genes
REACTOME ELECTRON TRANSPORT CHAINCOX5A, NDUFS5, NDUFA3, SDHA, NDUFS1, NDUFA7, CYC1, NDUFA2, NDUFA8, ETFB, UQCRC1, NDUFA6, NDUFS6, COX4I1, NDUFB6, COX6A1, NDUFA4, NDUFS2, COX8A, COX7C, UQCRC2, NDUFB2, NDUFB11, ETFA, NDUFC1
HSIAO HOUSEKEEPING GENESPRDX6, SET, ANXA2, RPS3A, YBX1, ATOX1, RPN2, CANX, RPL18, RPS9, IQGAP1, HMGN2, FLNA, PSMB5, CST3, ECHS1, HSPB1, ARPC2, YWHAQ, DDT, SEPT2, STAT3, CD81, COPA, SLC25A3, CD151, IRAK1, PDLIM1, PSMB6, PPIA, RAC1, RPL11, DDB1, RPL36AL, ARF4, NDUFA4, COX8A, CSNK2B, COX7C, RPL7, PSMD7, SEC61B, GNAS, PLP2, GPX1, ANXA11, CTNNB1, PFN1, ATP5A1, RPL6, GNB2L1, ARHGAP1, ITGB1, ATP5C1, GNB1, TMED10, CAPN2, LGALS1, HMGB1, PSMB2, VIM, COX4I1, OAZ1, SLC25A5, COX6A1, MGP, ATP5G3, NONO, RPL31, PSAP, PSMB3, SNRPD2, NACA, PSMB4
MOOTHA VOXPHOSNDUFS5, ATP5I, ATP5C1, NDUFA3, UQCR, SDHA, NDUFS1, CYC1, CYB5A, NGFRAP1, NDUFA8, UQCRC1, NDUFA6, NFKBIL2, NDUFS6, COX4I1, ATP5J2, NDUFA4, COX6A1, NDUFB6, NDUFS2, ATP5E, ATP5G3, COX8A, COX7C, UQCRC2, NDUFB2, ATP5L, NDUFC1
CORUM RESPIRATORY CHAIN COMPLEX I HOLOENZYME MITOCHONDRIALNDUFS6, NDUFS5, NDUFA3, NDUFA4, NDUFS2, NDUFB6, NDUFB2, NDUFS1, NDUFA7, NDUFB11, NDUFA2, NDUFC1
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 13POLE3, UQCR, NDUFA3, TCEB2, TMED3, ANXA2, ARMCX2, MRPL23, MRPL35, CCND1, UBL5, LGALS1, DAP, DBI, S100A6, DNAJC15, HDDC2, PAFAH1B3, COX6A1, ATP5E, NDUFS2, PMPCB, PPIB, SNRPD2, EBP, NDUFC1
FOURNIER ACINAR DEVELOPMENT LATE 2ANXA5, POLE3, CLPB, PLK1, ITGA3, MRPL17, C16ORF61, GLT25D1, PRPS1, PREB, SCD, PFN1, CDC6, RNASEH2A, EIF5B, NUP205, PALLD, FN1, HMBS, RAI14, IRAK1, CAD, GNB1, MTHFD1, CDC45L, FOXM1, TXNDC5, PTPLAD1, MCM4, PSMB2, GFPT1, ARF4, MBNL1, NCAPG2, DNAJC9, CALM1, CYP51A1, PRDX3, DNAJC10, IDI1, RFWD3, KDELR2, NT5DC2, KIF2C, BIRC5, ELK3
NCI ECADHERIN NASCENTAJ PATHWAYPIK3R1, CTTN, TIAM1, CCND1, CTNNA1, RAC1, CSNK2B, CTNNB1, JUP, IQGAP1, VAV2, CRK
NCI REMOVAL OF LICENSING FACTORS FROM ORIGINSPSMB2, PSMD14, PSMC5, PSMB5, PSMD7, CDC6, PSMB6, PSMB1, PSMD9, PSMB3, PSMA7, PSMB4
NCI ORC1 REMOVAL FROM CHROMATINPSMB2, PSMD14, PSMC5, PSMB5, PSMD7, CDC6, PSMB6, PSMB1, PSMD9, PSMB3, PSMA7, PSMB4
NCI VIF MEDIATED DEGRADATION OF APOBEC3GPSMB2, PSMC5, PSMB5, PSMD7, TCEB2, PSMA2, PSMB6, PSMB1, PSMA4, PSMB7, PSMD9, PSMB3, PSMA7, PSMB4
BONOME OVARIAN CANCER POOR SURVIVAL DNGLT25D1, PAOX, MTAP, EHMT2
VALK AML CLUSTER 9
SWEET KRAS ONCOGENIC SIGNATURE
CORUM RESPIRATORY CHAIN COMPLEX I INTERMEDIATE VII/650KD MITOCHONDRIAL
FERRANDO T ALL WITH MLL ENL FUSION DN
HONMA DOCETAXEL RESISTANCE
DANG MYC TARGETS UP
KEGG OXIDATIVE PHOSPHORYLATION
KEGG PARKINSONS DISEASE
REACTOME NUCLEOTIDE EXCISION REPAIR
CORUM RESPIRATORY CHAIN COMPLEX I BETA SUBUNIT MITOCHONDRIAL
NATSUME RESPONSE TO INTERFERON BETA DN
FONTAINE PAPILLARY THYROID CARCINOMA UP
REACTOME DIABETES PATHWAYS
LUI THYROID CANCER CLUSTER 3
REACTOME METABOLISM OF PROTEINS
LIAO METASTASIS
WANG RECURRENT LIVER CANCER UP
SESTO RESPONSE TO UV C8
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIAL
LI AMPLIFIED IN LUNG CANCER
MACLACHLAN BRCA1 TARGETS DN
FAELT B CLL WITH VH3 21 DN
CORUM PA28GAMMA-20S PROTEASOME
PENG LEUCINE DEPRIVATION DN
MOREIRA RESPONSE TO TSA UP
NCI SWITCHING OF ORIGINS TO A POST REPLICATIVE STATE
REACTOME SEMA3A PAK DEPENDENT AXON REPULSION
KOKKINAKIS METHIONINE DEPRIVATION 48HR DN
REACTOME APOPTOSIS INDUCED DNA FRAGMENTATION
TAKAO RESPONSE TO UVB RADIATION UP
NCI MRNA SPLICING MINOR PATHWAY
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecpseudomonas aeruginosa fdr1234helicobacter pylori kx1 npgecGeneSet Name
-0.00115 -0.00012 -0.00039REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.01320 -0.00009 -0.00554HSIAO_HOUSEKEEPING_GENES
-0.00217 -0.00189 -0.00036MOOTHA_VOXPHOS
-0.00691 -0.00053 -0.00042CORUM_RESPIRATORY_CHAIN_COMPLEX_I_HOLOENZYME_MITOCHONDRIAL
-0.00018 -0.07430 -0.00033YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13
-0.00795 -0.02059 -0.00300FOURNIER_ACINAR_DEVELOPMENT_LATE_2
-0.01684 -0.19731 -0.00460NCI_ECADHERIN_NASCENTAJ_PATHWAY
-0.00044 -0.17986 -0.00494NCI_REMOVAL_OF_LICENSING_FACTORS_FROM_ORIGINS
-0.00059 -0.19031 -0.00240NCI_ORC1_REMOVAL_FROM_CHROMATIN
-0.00002 -0.18578 -0.00392NCI_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
-0.01740 -0.11291 -0.00596BONOME_OVARIAN_CANCER_POOR_SURVIVAL_DN
-0.03393 -0.19937 -0.01547VALK_AML_CLUSTER_9
-0.16795 -0.05732 -0.05506SWEET_KRAS_ONCOGENIC_SIGNATURE
-0.03700 -0.07852 -0.03813CORUM_RESPIRATORY_CHAIN_COMPLEX_I_INTERMEDIATE_VII/650KD_MITOCHONDRIAL
-0.01294 -0.01989 -0.04601FERRANDO_T_ALL_WITH_MLL_ENL_FUSION_DN
-0.01960 -0.00998 -0.04574HONMA_DOCETAXEL_RESISTANCE
-0.09591 -0.18691 -0.17659DANG_MYC_TARGETS_UP
-0.02319 -0.04289 -0.00291KEGG_OXIDATIVE_PHOSPHORYLATION
-0.00236 -0.10298 -0.00043KEGG_PARKINSONS_DISEASE
-0.09745 -0.16151 -0.07672REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.14529 -0.09251 -0.00453CORUM_RESPIRATORY_CHAIN_COMPLEX_I_BETA_SUBUNIT_MITOCHONDRIAL
-0.01399 -0.03906 -0.01163NATSUME_RESPONSE_TO_INTERFERON_BETA_DN
-0.00983 -0.10420 -0.08868FONTAINE_PAPILLARY_THYROID_CARCINOMA_UP
-0.04914 -0.01605 -0.02860REACTOME_DIABETES_PATHWAYS
-0.03580 -0.12879 -0.11707LUI_THYROID_CANCER_CLUSTER_3
-0.10049 -0.01498 -0.09674REACTOME_METABOLISM_OF_PROTEINS
-0.15740 -0.15503 -0.03618LIAO_METASTASIS
-0.04592 -0.03093 -0.01680WANG_RECURRENT_LIVER_CANCER_UP
-0.14212 -0.13172 -0.10692SESTO_RESPONSE_TO_UV_C8
-0.07120 -0.05744 -0.02202CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.09141 -0.08529 -0.04276LI_AMPLIFIED_IN_LUNG_CANCER
-0.02704 -0.08300 -0.00298MACLACHLAN_BRCA1_TARGETS_DN
-0.11054 -0.05574 -0.16306FAELT_B_CLL_WITH_VH3_21_DN
-0.00033 -0.19934 -0.00082CORUM_PA28GAMMA-20S_PROTEASOME
-0.00901 -0.19317 -0.02746PENG_LEUCINE_DEPRIVATION_DN
-0.06419 -0.01481 -0.01889MOREIRA_RESPONSE_TO_TSA_UP
-0.00005 -0.10422 -0.00276NCI_SWITCHING_OF_ORIGINS_TO_A_POST_REPLICATIVE_STATE
-0.14956 -0.08328 -0.11567REACTOME_SEMA3A_PAK_DEPENDENT_AXON_REPULSION
-0.00519 -0.18021 -0.01704KOKKINAKIS_METHIONINE_DEPRIVATION_48HR_DN
-0.07225 -0.18468 -0.04036REACTOME_APOPTOSIS_INDUCED_DNA_FRAGMENTATION
-0.03255 -0.13019 -0.06534TAKAO_RESPONSE_TO_UVB_RADIATION_UP
-0.05016 -0.15900 -0.09559NCI_MRNA_SPLICING___MINOR_PATHWAY