BICLUSTER_ID : DNREG-646
PATHOGENS /3/ : pseudomonas aeruginosa,aggregatibacter actinomycetemcomitans,yersinia enterocolitica
TARGETS /25/ : NDUFS5, NDUFA3, NAGK, MGST3, NDUFB8, NDUFA1, MIF, NDUFA2, UQCRC1, PSMB2, NDUFA6, NDUFB3, NDUFB7, NDUFS6, PPIF, NDUFS4, ACAT2, PDHA1, SUCLG1, NDUFA4, NDUFB6, NDUFAB1, NDUFB2, NDUFS3, NDUFC1
Gene SetLeading Edge Genes
KEGG PARKINSONS DISEASENDUFS5, NDUFA3, UQCRH, NDUFA1, NDUFA2, UQCRC1, NDUFB7, ATP5O, UBE2G2, NDUFB3, NDUFS6, NDUFS4, UQCRQ, NDUFB6, NDUFA4, ATP5E, NDUFAB1, COX7C, NDUFB2, NDUFS3, NDUFC1
WONG MITOCHONDRIA GENE MODULENDUFA3, NDUFB8, MRPS33, MRPL40, MRPL18, NDUFB3, ATP5O, NDUFA6, NDUFS4, PPIF, COX4I1, PDHA1, SUCLG1, NDUFB6, ATP5E, ATP5G3, NDUFAB1, NDUFB2, COX6C, NDUFS3, ATP5L, NDUFC1, TIMM8B
KEGG HUNTINGTONS DISEASENDUFA3, POLR2L, NDUFA2, AP2S1, NDUFB7, ATP5O, UQCRC1, NDUFB3, NDUFS4, NDUFB6, ATP5E, POLR2H, NDUFAB1, DCTN2, NDUFB2, NDUFS3, NDUFC1
STARK PREFRONTAL CORTEX 22Q11 DELETION DNARPC5L, SEC61B, MGST3, MRPL17, DYNLRB1, HSPE1, POLR1D, DDX1, NTAN1, GUK1, PLEKHO1, ATP5E, COPS3, NDUFAB1, NDUFB2, NDUFS3, TIMM8B, PDCD6, NAGK, NENF, MRPS11, MRPL40, BUD31, NDUFA2, TPI1, SAC3D1, NDUFS4, RPL36AL, ACAT2, CCT5, SMYD2, POP7, SNRPD2, CCDC56, UFD1L
CORUM RESPIRATORY CHAIN COMPLEX I BETA SUBUNIT MITOCHONDRIALNDUFA4, NDUFB6, NDUFB3, NDUFB7, NDUFAB1, NDUFB2, NDUFB11
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 13NDUFA3, NDUFB8, MRPL23, MRPL35, MRPS33, UBL5, DYNLRB1, BUD31, NDUFA2, ATP5O, GUK1, ATP5E, NDUFAB1, CCDC56, NDUFC1, TIMM8B
WONG EMBRYONIC STEM CELL CORERRM2, HELLS, COX4NB, HSPE1, RPA3, TOP2A, HSPA14, PSMA7, CKS1B, KIF4A, ATP5O, NDUFB7, CCT5, POP7, NDUFAB1, NT5DC2, TIMM8B, BIRC5
REACTOME CELL CYCLE MITOTICPOLD4, KIF20A, CDK5RAP2, RRM2, DBF4, ORC6L, PSMD9, RPA3, PSMA7, MNAT1, CKS1B, PSMB2, DCTN2, ODF2, BIRC5, TUBGCP2
CAIRO HEPATOBLASTOMA CLASSES UPRDBP, RRM2, ZNHIT3, MRPS33, MIF, RPS9, TOP2A, MNAT1, RBX1, KIF4A, DDX1, CCT5, DDX39, GRK6, POP7, DNAJC9, NUP93, DNMT3A, KDELR1, NT5DC2, EXOSC2, BIRC5, ASPM
CORUM PA28-20S PROTEASOMEPSMB2, PSMB7, PSMA7, PSMB6
CORUM 20S PROTEASOME
REACTOME MRNA SPLICING MINOR PATHWAYPOLR2H, SF3B2, POLR2L
NCI TRANSCRIPTION COUPLED NER TC NER POLR2H, ERCC3, ERCC4, POLR2L, MNAT1
REACTOME S PHASE
REACTOME NUCLEOTIDE EXCISION REPAIRPOLR2H, ERCC3, ERCC4, POLD4, RPA3, POLR2L, MNAT1
MORI LARGE PRE BII LYMPHOCYTE UP
REACTOME DUAL INCISION REACTION IN TC NERPOLR2H, ERCC3, ERCC4, POLR2L, MNAT1
CORUM RNA POLYMERASE II CORE COMPLEXPOLR2H, POLR2I, POLR2L
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEXPOLR2H, ERCC3, ERCC4, POLR2L, MNAT1
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEXPOLR2H, POLR2B, POLR2I, POLR2L
REACTOME DIABETES PATHWAYS
NCI SWITCHING OF ORIGINS TO A POST REPLICATIVE STATE
NCI DUAL INCISION REACTION IN TC NERPOLR2H, ERCC3, ERCC4, POLR2L, MNAT1
NCI MICRORNA MIRNA BIOGENESISPOLR2H, POLR2B, POLR2C, POLR2L
NCI MRNA SPLICING MINOR PATHWAYPOLR2H, SF3B2, POLR2L
REACTOME TRANSCRIPTION COUPLED NERERCC3, ERCC4, POLD4, RFC2, POLR2L, POLR2H, POLR2B, RPA3, POLR2C, MNAT1
KEGG NUCLEOTIDE EXCISION REPAIRRBX1, ERCC3, ERCC4, POLD4, RPA3, MNAT1
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica wap bl6pseudomonas aeruginosa fdr1aggregatibacter actinomycetemcomitansGeneSet Name
-0.00356 -0.00002 -0.01663KEGG_PARKINSONS_DISEASE
-0.00008 -0.00001 -0.02845WONG_MITOCHONDRIA_GENE_MODULE
-0.00008 -0.00484 -0.00352KEGG_HUNTINGTONS_DISEASE
-0.00009 -0.14836 -0.03107STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.00595 -0.00379 -0.02489CORUM_RESPIRATORY_CHAIN_COMPLEX_I_BETA_SUBUNIT_MITOCHONDRIAL
-0.00008 -0.04394 -0.01265YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13
-0.00014 -0.16059 -0.00090WONG_EMBRYONIC_STEM_CELL_CORE
-0.02742 -0.13427 -0.01005REACTOME_CELL_CYCLE_MITOTIC
-0.00045 -0.05662 -0.00654CAIRO_HEPATOBLASTOMA_CLASSES_UP
-0.09009 -0.13384 -0.01214CORUM_PA28-20S_PROTEASOME
-0.14274 -0.03038 -0.01634CORUM_20S_PROTEASOME
-0.00011 -0.08493 -0.00045REACTOME_MRNA_SPLICING_MINOR_PATHWAY
-0.00010 -0.01290 -0.03700NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.16869 -0.03098 -0.00982REACTOME_S_PHASE
-0.00106 -0.05776 -0.00561REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.06022 -0.04269 -0.04933MORI_LARGE_PRE_BII_LYMPHOCYTE_UP
-0.00010 -0.01495 -0.03902REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.00093 -0.06943 -0.03463CORUM_RNA_POLYMERASE_II_CORE_COMPLEX
-0.00012 -0.01468 -0.04257NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00165 -0.11564 -0.03688CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.09692 -0.03497 -0.17936REACTOME_DIABETES_PATHWAYS
-0.17343 -0.13758 -0.04867NCI_SWITCHING_OF_ORIGINS_TO_A_POST_REPLICATIVE_STATE
-0.00009 -0.01495 -0.03924NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.00045 -0.16345 -0.02017NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00008 -0.04732 -0.00046NCI_MRNA_SPLICING___MINOR_PATHWAY
-0.00072 -0.06252 -0.00673REACTOME_TRANSCRIPTION_COUPLED_NER
-0.01686 -0.10245 -0.04266KEGG_NUCLEOTIDE_EXCISION_REPAIR