BICLUSTER_ID : DNREG-790
PATHOGENS /4/ : escherichia coli,bifidobacterium bifidum,porphyromonas gingivalis,ehrlichia chaffeensis
TARGETS /5/ : DUT, AURKA, RRM1, APEX1, IDH1
Gene SetLeading Edge Genes
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPSERPINH1, APEX1, MCM3, EIF2B1, CDC20, MCM5, NUP37, IDH1, PURA, AURKA, DDX46, IPO9, RFC4, PIGB, UCHL5, HSPA14
KAUFFMANN DNA REPAIR GENESDUT, APEX1, MLH1, TDP1, PMS1, ATM, MRE11A, RRM1, RFC4, NEIL3, RFC5, TOPBP1
KEGG BASE EXCISION REPAIR
REACTOME GLOBAL GENOMIC NERRFC5
LASTOWSKA NEUROBLASTOMA COPY NUMBER DN
WEST ADRENOCORTICAL TUMOR UP
REACTOME SYNTHESIS OF DNA
BORCZUK MALIGNANT MESOTHELIOMA UP
MOOTHA MITOCHONDRIA
REACTOME CELL CYCLE CHECKPOINTSATM, MCM3, CDC20, RFC4, MCM5, CDC25C, RFC5, DBF4
REACTOME DNA REPLICATION PRE INITIATION
REACTOME UNWINDING OF DNA
MOOTHA HUMAN MITODB 6 2002
NCI UNWINDING OF DNA
RICKMAN METASTASIS UP
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
bifidobacterium bifidumporphyromonas gingivalisescherichia coliehrlichia chaffeensis libertyGeneSet Name
-0.00072 -0.00366 -0.03431 -0.17557ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00001 -0.03015 -0.00003 -0.08733KAUFFMANN_DNA_REPAIR_GENES
-0.00058 -0.05239 -0.00057 -0.18700KEGG_BASE_EXCISION_REPAIR
-0.00003 -0.00963 -0.00018 -0.14181REACTOME_GLOBAL_GENOMIC_NER
-0.16280 -0.00531 -0.04179 -0.13498LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN
-0.00673 -0.04057 -0.10340 -0.00510WEST_ADRENOCORTICAL_TUMOR_UP
-0.00140 -0.00002 -0.17829 -0.11584REACTOME_SYNTHESIS_OF_DNA
-0.00139 -0.00191 -0.14538 -0.08517BORCZUK_MALIGNANT_MESOTHELIOMA_UP
-0.00104 -0.00039 -0.16932 -0.00150MOOTHA_MITOCHONDRIA
-0.00026 -0.00004 -0.03627 -0.05832REACTOME_CELL_CYCLE_CHECKPOINTS
-0.00189 -0.00014 -0.19797 -0.19897REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.00453 -0.16817 -0.01773 -0.17008REACTOME_UNWINDING_OF_DNA
-0.00015 -0.00076 -0.18777 -0.00160MOOTHA_HUMAN_MITODB_6_2002
-0.00503 -0.14377 -0.02928 -0.11524NCI_UNWINDING_OF_DNA
-0.06510 -0.02769 -0.01546 -0.17550RICKMAN_METASTASIS_UP
-0.00238 -0.00290 -0.00032 -0.11031KEGG_NUCLEOTIDE_EXCISION_REPAIR