BICLUSTER_ID : DNREG-80
PATHOGENS /4/ : mycobacterium tuberculosis,porphyromonas gingivalis,helicobacter pylori,burkholderia pseudomallei
TARGETS /10/ : NDUFB7, PAICS, NDUFS7, NDUFA3, NDUFB6, NDUFA10, NDUFS8, NDUFA7, NDUFS3, NDUFA2
Gene SetLeading Edge Genes
CORUM RESPIRATORY CHAIN COMPLEX I HOLOENZYME MITOCHONDRIALNDUFB7, NDUFA3, NDUFS7, NDUFB6, NDUFA10, NDUFS3, NDUFS8, NDUFA7, NDUFA2
ZHONG RESPONSE TO AZACITIDINE AND TSA DNPAICS, HDAC4, TBC1D5, PMS1, ITGB3BP, CIRBP, GOLPH3L, CCNA2, ICT1, LGTN
LOPEZ MESOTELIOMA SURVIVAL TIME UP
REACTOME CELL CYCLE MITOTIC
REACTOME LAGGING STRAND SYNTHESIS
NAKAYAMA SOFT TISSUE TUMORS PCA2 UP
NCI CENTROSOME MATURATION
PUJANA BRCA1 PCC NETWORK
KUMAMOTO RESPONSE TO NUTLIN 3A DN
PAL PRMT5 TARGETS UP
REACTOME REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
REACTOME RNA POLYMERASE II TRANSCRIPTION
ZHAN MULTIPLE MYELOMA SUBGROUPS
ODONNELL TARGETS OF MYC AND TFRC DN
NCI PLK1 PATHWAY
REACTOME NUCLEOTIDE EXCISION REPAIR
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI PROCESSIVE SYNTHESIS ON THE LAGGING STRAND
CORUM DDB2 COMPLEX
REACTOME CENTROSOME MATURATION
BUYTAERT PHOTODYNAMIC THERAPY STRESS DN
REACTOME GLOBAL GENOMIC NER
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
NCI LOSS OF PROTEINS REQUIRED FOR INTERPHASE MICROTUBULE ORGANIZATION FROM THE CENTROSOME
BASAKI YBX1 TARGETS UP
REACTOME ELONGATION AND PROCESSING OF CAPPED TRANSCRIPTS
REACTOME G2 M TRANSITION
REACTOME DOUBLE STRAND BREAK REPAIR
REACTOME TRANSCRIPTION COUPLED NER
KEGG RNA POLYMERASE
NCI MITOTIC PROMETAPHASECDC20, BUB1, MLF1IP, ZWINT, PLK1, AURKB, ITGB3BP, CKAP5, CENPE, NUP43, KNTC1, KIF2C, BIRC5
PUJANA BREAST CANCER LIT INT NETWORK
REACTOME LOSS OF NLP FROM MITOTIC CENTROSOMES
LE EGR2 TARGETS UP
CORUM DNA SYNTHESOME COMPLEX 13 SUBUNITS
KEGG PYRIMIDINE METABOLISM
REACTOME VIRAL MESSENGER RNA SYNTHESIS
REACTOME DNA REPAIR
ZHANG RESPONSE TO CANTHARIDIN DN
TANG SENESCENCE TP53 TARGETS DNKIF4A, FBXO5, CDC20, UBE2C, SPAG5, PRC1, CENPE, CCNA2, BIRC5
REACTOME SYNTHESIS OF DNA
SHEDDEN LUNG CANCER POOR SURVIVAL A6
KAUFFMANN DNA REPAIR GENES
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEX
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
NCI BARD1PATHWAY
MOOTHA VOXPHOS
CORUM DNA SYNTHESOME COMPLEX 15 SUBUNITS
NCI FOXM1PATHWAY
REACTOME MRNA 3 END PROCESSING
REACTOME LATE PHASE OF HIV LIFE CYCLE
FURUKAWA DUSP6 TARGETS PCI35 DN
NCI POLYMERASE SWITCHING
BENPORATH CYCLING GENES
REACTOME ELECTRON TRANSPORT CHAIN
CORUM RC COMPLEX REPLICATION COMPETENT COMPLEX
KAUFFMANN DNA REPLICATION GENES
NCI SNRNP ASSEMBLY
REACTOME TELOMERE MAINTENANCE
CORUM DNA SYNTHESOME COMPLEX 17 SUBUNITS
CORUM RC COMPLEX DURING G2/M-PHASE OF CELL CYCLE
PRAMOONJAGO SOX4 TARGETS DN
REACTOME MITOTIC PROMETAPHASE
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICING
REACTOME POLYMERASE SWITCHING
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
MUELLER PLURINET
TOYOTA TARGETS OF MIR34B AND MIR34C
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TAT
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
SUNG METASTASIS STROMA DN
REACTOME EXTENSION OF TELOMERES
NCI LOSS OF NLP FROM MITOTIC CENTROSOMES
FINETTI BREAST CANCER BASAL VS LUMINAL
NCI RECRUITMENT OF MITOTIC CENTROSOME PROTEINS AND COMPLEXES
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIAL
SCHLOSSER MYC AND SERUM RESPONSE SYNERGY
NCI POLYMERASE SWITCHING ON THE C STRAND OF THE TELOMERE
REACTOME SNRNP ASSEMBLY
NCI CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION
NCI TELOMERE C STRAND LAGGING STRAND SYNTHESIS
NCI REPAIR SYNTHESIS OF PATCH 27 30 BASES LONG BY DNA POLYMERASE
REACTOME S PHASE
KEGG CELL CYCLE
FINETTI BREAST CANCER KINOME RED
KEGG BASE EXCISION REPAIR
MOREAUX MULTIPLE MYELOMA BY TACI DN
CORUM ALL-1 SUPERCOMPLEX
REACTOME HIV LIFE CYCLE
REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS
NCI MICRORNA MIRNA BIOGENESIS
CORUM RC COMPLEX DURING S-PHASE OF CELL CYCLE
REACTOME FORMATION AND MATURATION OF MRNA TRANSCRIPT
NCI MRNA 3 END PROCESSING
DODD NASOPHARYNGEAL CARCINOMA DN
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecburkholderia pseudomalleiporphyromonas gingivalismycobacterium tuberculosisGeneSet Name
-0.00691 -0.00033 -0.00037 -0.02035CORUM_RESPIRATORY_CHAIN_COMPLEX_I_HOLOENZYME_MITOCHONDRIAL
-0.01265 -0.00012 -0.00819 -0.00141ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.02710 -0.04587 -0.05952 -0.01026LOPEZ_MESOTELIOMA_SURVIVAL_TIME_UP
-0.00105 -0.00064 -0.00002 -0.00028REACTOME_CELL_CYCLE_MITOTIC
-0.16883 -0.00432 -0.04312 -0.00043REACTOME_LAGGING_STRAND_SYNTHESIS
-0.01845 -0.00013 -0.12871 -0.01519NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_UP
-0.02446 -0.11544 -0.00504 -0.00411NCI_CENTROSOME_MATURATION
-0.04039 -0.00005 -0.02359 -0.12426PUJANA_BRCA1_PCC_NETWORK
-0.04464 -0.00073 -0.07522 -0.06205KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00055 -0.00005 -0.00394 -0.01450PAL_PRMT5_TARGETS_UP
-0.01594 -0.00197 -0.10690 -0.00001REACTOME_REPAIR_SYNTHESIS_OF_PATCH_27_30_BASES_LONG_BY_DNA_POLYMERASE
-0.16819 -0.01090 -0.00011 -0.16804REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.03354 -0.00011 -0.08383 -0.02974ZHAN_MULTIPLE_MYELOMA_SUBGROUPS
-0.08707 -0.00005 -0.02032 -0.03017ODONNELL_TARGETS_OF_MYC_AND_TFRC_DN
-0.00213 -0.00005 -0.04287 -0.00148NCI_PLK1_PATHWAY
-0.09745 -0.00208 -0.00069 -0.00034REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.09746 -0.05182 -0.00311 -0.05031REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.05628 -0.08753 -0.04140 -0.12261NCI_PROCESSIVE_SYNTHESIS_ON_THE_LAGGING_STRAND
-0.06534 -0.19429 -0.08330 -0.16741CORUM_DDB2_COMPLEX
-0.01435 -0.03691 -0.00441 -0.00035REACTOME_CENTROSOME_MATURATION
-0.00546 -0.00001 -0.17539 -0.13556BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN
-0.08982 -0.01224 -0.00963 -0.00003REACTOME_GLOBAL_GENOMIC_NER
-0.01553 -0.00243 -0.10445 -0.00004NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.02230 -0.11334 -0.00549 -0.00362NCI_LOSS_OF_PROTEINS_REQUIRED_FOR_INTERPHASE_MICROTUBULE_ORGANIZATION_FROM_THE_CENTROSOME
-0.00636 -0.00039 -0.01567 -0.00260BASAKI_YBX1_TARGETS_UP
-0.12318 -0.00002 -0.00004 -0.03736REACTOME_ELONGATION_AND_PROCESSING_OF_CAPPED_TRANSCRIPTS
-0.00735 -0.03193 -0.00453 -0.00052REACTOME_G2_M_TRANSITION
-0.04117 -0.02025 -0.18394 -0.05094REACTOME_DOUBLE_STRAND_BREAK_REPAIR
-0.12290 -0.00209 -0.00087 -0.00065REACTOME_TRANSCRIPTION_COUPLED_NER
-0.18788 -0.11043 -0.02723 -0.09151KEGG_RNA_POLYMERASE
-0.00583 -0.00002 -0.02882 -0.00003NCI_MITOTIC_PROMETAPHASE
-0.02506 -0.00027 -0.18376 -0.15164PUJANA_BREAST_CANCER_LIT_INT_NETWORK
-0.01955 -0.06128 -0.00203 -0.00111REACTOME_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES
-0.01341 -0.00005 -0.04284 -0.04583LE_EGR2_TARGETS_UP
-0.10675 -0.01432 -0.05256 -0.00382CORUM_DNA_SYNTHESOME_COMPLEX_13_SUBUNITS
-0.08178 -0.00190 -0.03117 -0.16886KEGG_PYRIMIDINE_METABOLISM
-0.11755 -0.10174 -0.02984 -0.17045REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.06785 -0.00513 -0.00081 -0.00002REACTOME_DNA_REPAIR
-0.11079 -0.00001 -0.07046 -0.00471ZHANG_RESPONSE_TO_CANTHARIDIN_DN
-0.01416 -0.00127 -0.01342 -0.00123TANG_SENESCENCE_TP53_TARGETS_DN
-0.00016 -0.04929 -0.00002 -0.18874REACTOME_SYNTHESIS_OF_DNA
-0.02761 -0.00001 -0.00219 -0.00051SHEDDEN_LUNG_CANCER_POOR_SURVIVAL_A6
-0.09101 -0.00140 -0.03015 -0.00010KAUFFMANN_DNA_REPAIR_GENES
-0.13718 -0.14953 -0.00452 -0.02215REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.09503 -0.00070 -0.19698 -0.12221MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.00008 -0.00861 -0.09414 -0.03797NCI_BARD1PATHWAY
-0.00217 -0.00001 -0.00002 -0.19524MOOTHA_VOXPHOS
-0.09176 -0.04316 -0.09697 -0.00225CORUM_DNA_SYNTHESOME_COMPLEX_15_SUBUNITS
-0.00508 -0.05827 -0.04533 -0.10949NCI_FOXM1PATHWAY
-0.18906 -0.00483 -0.00568 -0.15105REACTOME_MRNA_3_END_PROCESSING
-0.17593 -0.01716 -0.00065 -0.05945REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.06729 -0.00046 -0.02975 -0.00012FURUKAWA_DUSP6_TARGETS_PCI35_DN
-0.03840 -0.02540 -0.03735 -0.00891NCI_POLYMERASE_SWITCHING
-0.02705 -0.00026 -0.13199 -0.04552BENPORATH_CYCLING_GENES
-0.00115 -0.00001 -0.00001 -0.04570REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.16773 -0.06193 -0.11393 -0.03846CORUM_RC_COMPLEX_REPLICATION_COMPETENT_COMPLEX
-0.06732 -0.00351 -0.17966 -0.01674KAUFFMANN_DNA_REPLICATION_GENES
-0.07564 -0.00157 -0.02236 -0.03485NCI_SNRNP_ASSEMBLY
-0.05244 -0.05514 -0.04272 -0.02484REACTOME_TELOMERE_MAINTENANCE
-0.06173 -0.00750 -0.10704 -0.00019CORUM_DNA_SYNTHESOME_COMPLEX_17_SUBUNITS
-0.06224 -0.00378 -0.02345 -0.00340CORUM_RC_COMPLEX_DURING_G2/M-PHASE_OF_CELL_CYCLE
-0.02012 -0.00016 -0.15277 -0.17262PRAMOONJAGO_SOX4_TARGETS_DN
-0.00148 -0.00003 -0.02038 -0.00015REACTOME_MITOTIC_PROMETAPHASE
-0.03275 -0.01126 -0.00459 -0.04820NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.14684 -0.02651 -0.04189 -0.00739REACTOME_POLYMERASE_SWITCHING
-0.14151 -0.12436 -0.07827 -0.07164CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.07611 -0.00002 -0.00024 -0.00113MUELLER_PLURINET
-0.01704 -0.00288 -0.08221 -0.00441TOYOTA_TARGETS_OF_MIR34B_AND_MIR34C
-0.07079 -0.10211 -0.00365 -0.03917NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.04603 -0.01642 -0.07138 -0.05761RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.19459 -0.00768 -0.09224 -0.06911SUNG_METASTASIS_STROMA_DN
-0.11495 -0.00082 -0.04101 -0.00002REACTOME_EXTENSION_OF_TELOMERES
-0.02233 -0.10973 -0.00529 -0.00444NCI_LOSS_OF_NLP_FROM_MITOTIC_CENTROSOMES
-0.03351 -0.00016 -0.09172 -0.00194FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.01267 -0.10845 -0.01427 -0.00445NCI_RECRUITMENT_OF_MITOTIC_CENTROSOME_PROTEINS_AND_COMPLEXES
-0.01014 -0.00316 -0.00458 -0.10453NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.07120 -0.04865 -0.00340 -0.02334CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.14859 -0.00102 -0.02942 -0.03573SCHLOSSER_MYC_AND_SERUM_RESPONSE_SYNERGY
-0.03917 -0.01932 -0.04212 -0.00770NCI_POLYMERASE_SWITCHING_ON_THE_C_STRAND_OF_THE_TELOMERE
-0.13331 -0.00158 -0.02656 -0.03479REACTOME_SNRNP_ASSEMBLY
-0.18084 -0.00435 -0.00937 -0.13101NCI_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_
-0.06795 -0.10843 -0.08378 -0.18674NCI_TELOMERE_C_STRAND__LAGGING_STRAND__SYNTHESIS
-0.01622 -0.00235 -0.10699 -0.00004NCI_REPAIR_SYNTHESIS_OF_PATCH__27_30_BASES_LONG__BY_DNA_POLYMERASE
-0.00017 -0.01960 -0.00004 -0.14471REACTOME_S_PHASE
-0.00787 -0.00013 -0.10582 -0.06629KEGG_CELL_CYCLE
-0.02908 -0.00049 -0.15753 -0.00240FINETTI_BREAST_CANCER_KINOME_RED
-0.02205 -0.00205 -0.05239 -0.00004KEGG_BASE_EXCISION_REPAIR
-0.10216 -0.00204 -0.00320 -0.00807MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.08132 -0.05123 -0.15423 -0.03287CORUM_ALL-1_SUPERCOMPLEX
-0.17563 -0.00484 -0.00047 -0.04021REACTOME_HIV_LIFE_CYCLE
-0.06882 -0.12665 -0.08211 -0.02714REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS
-0.13224 -0.06554 -0.05276 -0.03469NCI_MICRORNA__MIRNA__BIOGENESIS
-0.08118 -0.03038 -0.06132 -0.01273CORUM_RC_COMPLEX_DURING_S-PHASE_OF_CELL_CYCLE
-0.12357 -0.00012 -0.00004 -0.08296REACTOME_FORMATION_AND_MATURATION_OF_MRNA_TRANSCRIPT
-0.18598 -0.00331 -0.00832 -0.16771NCI_MRNA_3__END_PROCESSING
-0.03870 -0.00001 -0.02277 -0.17486DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.15205 -0.01443 -0.00290 -0.00038KEGG_NUCLEOTIDE_EXCISION_REPAIR