BICLUSTER_ID : DNREG-88
PATHOGENS /4/ : bifidobacterium bifidum,lactobacillus acidophilus,aeromonas caviae,mycobacterium tuberculosis
TARGETS /1/ : IARS
Gene SetLeading Edge Genes
BOYAULT LIVER CANCER SUBCLASS G23 UPSMC2, TUBG1, MCM3, CCNE2, IARS, CENPA
REACTOME REGULATION OF GLUCOKINASE BY GLUCOKINASE REGULATORY PROTEIN
NCI NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY
FERRANDO HOX11 NEIGHBORS
NCI TAT MEDIATED ELONGATION OF THE HIV 1 TRANSCRIPT
NCI TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRON CONTAINING TRANSCRIPTSFRS3, NUP37, NUP160, SFRS1, SFRS6, NCBP2, U2AF2, AAAS
REACTOME VPR MEDIATED NUCLEAR IMPORT OF PICS
BOYAULT LIVER CANCER SUBCLASS G123 UP
REACTOME RNA POL II CTD PHOSPHORYLATION AND INTERACTION WITH CE
RHODES UNDIFFERENTIATED CANCER
REACTOME NUCLEAR IMPORT OF REV PROTEIN
REACTOME RNA POLYMERASE II TRANSCRIPTION
ZHAN MULTIPLE MYELOMA SUBGROUPSPOLD2, CKS1B, MAZ, EIF2B1, MSH2, RANBP1, DFFA, PRKDC, PRIM1, XRCC6
NCI TRANSPORT OF MATURE TRANSCRIPT TO CYTOPLASM
REACTOME NUCLEOTIDE EXCISION REPAIRPOLD2, DDB1, POLR2L, POLE2, POLR2H, RPA1, RFC4, RPA3, GTF2H4, MNAT1
REACTOME ABORTIVE ELONGATION OF HIV1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI VPR MEDIATED NUCLEAR IMPORT OF PICS
CORUM F1F0-ATP SYNTHASE EC 3.6.3.14 MITOCHONDRIAL
MOREAUX B LYMPHOCYTE MATURATION BY TACI DN
REACTOME GLOBAL GENOMIC NER
NCI FORMATION OF THE HIV 1 EARLY ELONGATION COMPLEX
GAJATE RESPONSE TO TRABECTEDIN DN
REACTOME REV MEDIATED NUCLEAR EXPORT OF HIV1 RNA
REACTOME DOUBLE STRAND BREAK REPAIR
REACTOME TRANSCRIPTION COUPLED NERPOLD2, POLR2F, POLR2L, POLE2, POLR2H, RPA1, RFC4, RPA3, GTF2H4, POLD1, POLR2J, MNAT1
VERNELL RETINOBLASTOMA PATHWAY UP
KEGG VALINE LEUCINE AND ISOLEUCINE BIOSYNTHESIS
KEGG SPLICEOSOME
NCI MRNA CAPPING
KEGG RNA POLYMERASE
NCI FORMATION OF THE EARLY ELONGATION COMPLEX
NCI LATE PHASE OF HIV LIFE CYCLE
NCI RNA POLYMERASE II TRANSCRIPTION ELONGATION
REACTOME TRANSPORT OF THE SLBP INDEPENDENT MATURE MRNA
NCI UNWINDING OF DNA
KEGG PYRIMIDINE METABOLISM
REACTOME VIRAL MESSENGER RNA SYNTHESIS
NCI TRANSPORT OF MATURE MRNAS DERIVED FROM INTRONLESS TRANSCRIPTS
NCI TRANSPORT OF THE SLBP DEPENDANT MATURE MRNA
NCI HIV 1 TRANSCRIPTION ELONGATION
REACTOME SYNTHESIS OF DNA
NCI SYNTHESIS OF DNA
SCIBETTA KDM5B TARGETS DN
XU RESPONSE TO TRETINOIN AND NSC682994 DN
NCI DUAL INCISION REACTION IN TC NER
REACTOME NEP NS2 INTERACTS WITH THE CELLULAR EXPORT MACHINERY
REACTOME FORMATION OF THE EARLY ELONGATION COMPLEX
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
NCI NUCLEAR IMPORT OF REV PROTEIN
NCI FORMATION OF HIV 1 ELONGATION COMPLEX CONTAINING HIV 1 TAT
REACTOME LATE PHASE OF HIV LIFE CYCLENUP160, POLR2L, TCEB2, RANBP1, TAF10, RAN, POLR2H, NCBP2, GTF2H4, AAAS, MNAT1
REACTOME MRNA 3 END PROCESSING
BIOCARTA RANMS PATHWAY
CORUM TIP49-TIP48-BAF53 COMPLEX
NCI TRANSPORT OF THE SLBP INDEPENDENT MATURE MRNA
NCI TRANSCRIPTION COUPLED NER TC NER
NCI FORMATION OF RNA POL II ELONGATION COMPLEX
NCI ELONGATION OF INTRON CONTAINING TRANSCRIPTS AND CO TRANSCRIPTIONAL MRNA SPLICINGPOLR2E, POLR2F, POLR2I, POLR2L, METTL3, CCNH, POLR2H, NCBP2, GTF2H4, RBMX, POLR2J, MNAT1
NCI FORMATION OF TRANSCRIPTION COUPLED NER TC NER REPAIR COMPLEX
REACTOME MICRORNA BIOGENESIS
CORUM BRCA1-CORE RNA POLYMERASE II COMPLEX
NCI DNA REPLICATION
NCI E2F TRANSCRIPTIONAL TARGETS AT G1 S
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
NCI ABORTIVE ELONGATION OF HIV 1 TRANSCRIPT IN THE ABSENCE OF TAT
NCI E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
SUNG METASTASIS STROMA DN
NCI PROCESSING OF CAPPED INTRON CONTAINING PRE MRNA
NCI TRANSPORT OF MATURE MRNA DERIVED FROM AN INTRONLESS TRANSCRIPT
NCI REV MEDIATED NUCLEAR EXPORT OF HIV 1 RNA
CORUM RESPIRATORY CHAIN COMPLEX I LAMBDA SUBUNIT MITOCHONDRIAL
SCHLOSSER MYC AND SERUM RESPONSE SYNERGY
CHIANG LIVER CANCER SUBCLASS UNANNOTATED DN
CORUM MULTISYNTHETASE COMPLEX
REACTOME E2F ENABLED INHIBITION OF PRE REPLICATION COMPLEX FORMATION
NCI CLEAVAGE OF GROWING TRANSCRIPT IN THE TERMINATION REGION
NCI TRANSPORT OF RIBONUCLEOPROTEINS INTO THE HOST NUCLEUS
CAFFAREL RESPONSE TO THC 24HR 5 DN
REACTOME HIV1 TRANSCRIPTION ELONGATION
REACTOME DUAL INCISION REACTION IN TC NER
CORUM SRCAP-ASSOCIATED CHROMATIN REMODELING COMPLEX
MOREAUX MULTIPLE MYELOMA BY TACI DN
RHODES CANCER META SIGNATURE
NIKOLSKY BREAST CANCER 16P13 AMPLICON
REACTOME HIV LIFE CYCLENUP160, POLR2L, TCEB2, RANBP1, TAF10, RAN, POLR2H, NCBP2, BANF1, GTF2H4, AAAS, MNAT1
NCI MICRORNA MIRNA BIOGENESIS
NCI MRNA 3 END PROCESSING
STEIN ESR1 TARGETS
NCI INTERACTIONS OF REV WITH HOST CELLULAR PROTEINS
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
lactobacillus acidophilusbifidobacterium bifidummycobacterium tuberculosisaeromonas caviaGeneSet Name
-0.00067 -0.00003 -0.07599 -0.01335BOYAULT_LIVER_CANCER_SUBCLASS_G23_UP
-0.02757 -0.00054 -0.09454 -0.17697REACTOME_REGULATION_OF_GLUCOKINASE_BY_GLUCOKINASE_REGULATORY_PROTEIN
-0.03515 -0.00181 -0.08341 -0.10943NCI_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY
-0.02052 -0.00477 -0.04603 -0.18908FERRANDO_HOX11_NEIGHBORS
-0.01390 -0.05645 -0.18908 -0.00551NCI_TAT_MEDIATED_ELONGATION_OF_THE_HIV_1_TRANSCRIPT
-0.00073 -0.00006 -0.03731 -0.03463NCI_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRON_CONTAINING_TRANSCRIPT
-0.01653 -0.00037 -0.09266 -0.07040REACTOME_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS
-0.09604 -0.05508 -0.00026 -0.02327BOYAULT_LIVER_CANCER_SUBCLASS_G123_UP
-0.03335 -0.02460 -0.19532 -0.00414REACTOME_RNA_POL_II_CTD_PHOSPHORYLATION_AND_INTERACTION_WITH_CE
-0.00080 -0.00003 -0.00660 -0.08510RHODES_UNDIFFERENTIATED_CANCER
-0.00607 -0.00005 -0.11698 -0.10667REACTOME_NUCLEAR_IMPORT_OF_REV_PROTEIN
-0.00169 -0.01082 -0.16804 -0.00627REACTOME_RNA_POLYMERASE_II_TRANSCRIPTION
-0.00541 -0.00071 -0.02974 -0.02796ZHAN_MULTIPLE_MYELOMA_SUBGROUPS
-0.03208 -0.00211 -0.08639 -0.11348NCI_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM
-0.00033 -0.00004 -0.00034 -0.02788REACTOME_NUCLEOTIDE_EXCISION_REPAIR
-0.00263 -0.00855 -0.05031 -0.03379REACTOME_ABORTIVE_ELONGATION_OF_HIV1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.03915 -0.00165 -0.17554 -0.06983NCI_VPR_MEDIATED_NUCLEAR_IMPORT_OF_PICS
-0.07899 -0.00390 -0.15924 -0.01918CORUM_F1F0-ATP_SYNTHASE_EC_3.6.3.14_MITOCHONDRIAL
-0.03986 -0.00212 -0.11011 -0.02451MOREAUX_B_LYMPHOCYTE_MATURATION_BY_TACI_DN
-0.00101 -0.00003 -0.00003 -0.14426REACTOME_GLOBAL_GENOMIC_NER
-0.00200 -0.00444 -0.03681 -0.00213NCI_FORMATION_OF_THE_HIV_1_EARLY_ELONGATION_COMPLEX
-0.03926 -0.06369 -0.11867 -0.06056GAJATE_RESPONSE_TO_TRABECTEDIN_DN
-0.01582 -0.00018 -0.04350 -0.03937REACTOME_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV1_RNA
-0.00636 -0.00009 -0.05094 -0.13894REACTOME_DOUBLE_STRAND_BREAK_REPAIR
-0.00076 -0.00003 -0.00065 -0.01564REACTOME_TRANSCRIPTION_COUPLED_NER
-0.11739 -0.00023 -0.15140 -0.15256VERNELL_RETINOBLASTOMA_PATHWAY_UP
-0.03434 -0.00585 -0.17935 -0.13732KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS
-0.00194 -0.00291 -0.17443 -0.01804KEGG_SPLICEOSOME
-0.01397 -0.00908 -0.13473 -0.00231NCI_MRNA_CAPPING
-0.00168 -0.00104 -0.09151 -0.13324KEGG_RNA_POLYMERASE
-0.00230 -0.00434 -0.02665 -0.00204NCI_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.03983 -0.00149 -0.07624 -0.14763NCI_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.00937 -0.04172 -0.10821 -0.00851NCI_RNA_POLYMERASE_II_TRANSCRIPTION_ELONGATION
-0.00617 -0.00011 -0.07177 -0.06364REACTOME_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA
-0.00096 -0.00503 -0.00261 -0.09060NCI_UNWINDING_OF_DNA
-0.00008 -0.00001 -0.16886 -0.02055KEGG_PYRIMIDINE_METABOLISM
-0.01591 -0.01609 -0.17045 -0.04282REACTOME_VIRAL_MESSENGER_RNA_SYNTHESIS
-0.01560 -0.00092 -0.07607 -0.07413NCI_TRANSPORT_OF_MATURE_MRNAS_DERIVED_FROM_INTRONLESS_TRANSCRIPTS
-0.01760 -0.00119 -0.08231 -0.05587NCI_TRANSPORT_OF_THE_SLBP_DEPENDANT_MATURE_MRNA
-0.00177 -0.00484 -0.02802 -0.00209NCI_HIV_1_TRANSCRIPTION_ELONGATION
-0.03098 -0.00140 -0.18874 -0.13465REACTOME_SYNTHESIS_OF_DNA
-0.02542 -0.01158 -0.02330 -0.15502NCI_SYNTHESIS_OF_DNA
-0.00009 -0.00001 -0.19518 -0.10579SCIBETTA_KDM5B_TARGETS_DN
-0.00173 -0.02069 -0.11575 -0.12819XU_RESPONSE_TO_TRETINOIN_AND_NSC682994_DN
-0.04224 -0.10993 -0.03560 -0.01903NCI_DUAL_INCISION_REACTION_IN_TC_NER
-0.01202 -0.00023 -0.08978 -0.10318REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY
-0.00352 -0.00700 -0.02215 -0.00224REACTOME_FORMATION_OF_THE_EARLY_ELONGATION_COMPLEX
-0.02388 -0.00150 -0.12221 -0.03498MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.02925 -0.00068 -0.10843 -0.11140NCI_NUCLEAR_IMPORT_OF_REV_PROTEIN
-0.00869 -0.03232 -0.11867 -0.00353NCI_FORMATION_OF_HIV_1_ELONGATION_COMPLEX_CONTAINING_HIV_1_TAT
-0.00265 -0.00077 -0.05945 -0.00060REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE
-0.00092 -0.00212 -0.15105 -0.06448REACTOME_MRNA_3_END_PROCESSING
-0.09587 -0.02126 -0.05280 -0.12223BIOCARTA_RANMS_PATHWAY
-0.08952 -0.12083 -0.10685 -0.15980CORUM_TIP49-TIP48-BAF53_COMPLEX
-0.01528 -0.00075 -0.06669 -0.07671NCI_TRANSPORT_OF_THE_SLBP_INDEPENDENT_MATURE_MRNA
-0.04150 -0.11001 -0.03470 -0.01764NCI_TRANSCRIPTION_COUPLED_NER__TC_NER_
-0.00959 -0.03789 -0.09980 -0.00984NCI_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_
-0.00308 -0.00183 -0.04820 -0.00192NCI_ELONGATION_OF_INTRON_CONTAINING_TRANSCRIPTS_AND_CO_TRANSCRIPTIONAL_MRNA_SPLICING
-0.04376 -0.11951 -0.04537 -0.01902NCI_FORMATION_OF_TRANSCRIPTION_COUPLED_NER__TC_NER__REPAIR_COMPLEX
-0.00041 -0.00181 -0.02036 -0.05268REACTOME_MICRORNA_BIOGENESIS
-0.00634 -0.01355 -0.07164 -0.16746CORUM_BRCA1-CORE_RNA_POLYMERASE_II_COMPLEX
-0.03064 -0.01085 -0.02671 -0.15125NCI_DNA_REPLICATION
-0.01184 -0.00002 -0.10456 -0.09146NCI_E2F_TRANSCRIPTIONAL_TARGETS_AT_G1_S
-0.06171 -0.02139 -0.05761 -0.17884RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.00164 -0.00745 -0.03917 -0.03056NCI_ABORTIVE_ELONGATION_OF_HIV_1_TRANSCRIPT_IN_THE_ABSENCE_OF_TAT
-0.03972 -0.19704 -0.08439 -0.17335NCI_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.00058 -0.00038 -0.06911 -0.16755SUNG_METASTASIS_STROMA_DN
-0.00512 -0.00077 -0.10453 -0.01716NCI_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA
-0.01006 -0.00035 -0.04366 -0.12851NCI_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT
-0.05291 -0.00082 -0.05093 -0.04359NCI_REV_MEDIATED_NUCLEAR_EXPORT_OF_HIV_1_RNA
-0.01714 -0.01698 -0.02334 -0.00581CORUM_RESPIRATORY_CHAIN_COMPLEX_I_LAMBDA_SUBUNIT_MITOCHONDRIAL
-0.00809 -0.01125 -0.03573 -0.09270SCHLOSSER_MYC_AND_SERUM_RESPONSE_SYNERGY
-0.00561 -0.00019 -0.14510 -0.00408CHIANG_LIVER_CANCER_SUBCLASS_UNANNOTATED_DN
-0.01897 -0.03490 -0.08312 -0.04347CORUM_MULTISYNTHETASE_COMPLEX
-0.02385 -0.12386 -0.18277 -0.05536REACTOME_E2F_ENABLED_INHIBITION_OF_PRE_REPLICATION_COMPLEX_FORMATION
-0.00128 -0.00297 -0.13101 -0.08185NCI_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_
-0.03423 -0.00120 -0.19541 -0.08755NCI_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS
-0.03453 -0.01724 -0.17204 -0.01792CAFFAREL_RESPONSE_TO_THC_24HR_5_DN
-0.01044 -0.03851 -0.10816 -0.00365REACTOME_HIV1_TRANSCRIPTION_ELONGATION
-0.04348 -0.11668 -0.04734 -0.01915REACTOME_DUAL_INCISION_REACTION_IN_TC_NER
-0.08399 -0.04765 -0.01842 -0.03485CORUM_SRCAP-ASSOCIATED_CHROMATIN_REMODELING_COMPLEX
-0.01167 -0.00105 -0.00807 -0.00005MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.03156 -0.00528 -0.17263 -0.00533RHODES_CANCER_META_SIGNATURE
-0.00423 -0.01522 -0.15140 -0.09949NIKOLSKY_BREAST_CANCER_16P13_AMPLICON
-0.00143 -0.00038 -0.04021 -0.00221REACTOME_HIV_LIFE_CYCLE
-0.00152 -0.00706 -0.03469 -0.06021NCI_MICRORNA__MIRNA__BIOGENESIS
-0.00125 -0.00288 -0.16771 -0.07746NCI_MRNA_3__END_PROCESSING
-0.01528 -0.00142 -0.07771 -0.05930STEIN_ESR1_TARGETS
-0.04703 -0.00142 -0.07596 -0.14357NCI_INTERACTIONS_OF_REV_WITH_HOST_CELLULAR_PROTEINS
-0.00448 -0.00238 -0.00038 -0.02124KEGG_NUCLEOTIDE_EXCISION_REPAIR