BICLUSTER_ID : DNREG-90
PATHOGENS /5/ : pseudomonas aeruginosa,lactobacillus acidophilus,porphyromonas gingivalis,helicobacter pylori,burkholderia pseudomallei
TARGETS /5/ : NDUFS2, NDUFA6, MGST3, BLVRA, IDH1
Gene SetLeading Edge Genes
ACEVEDO LIVER TUMOR VS NORMAL ADJACENT TISSUE UPNHP2L1, WRB, MAGOH, CETN2, ILF2, CCT8, MGST3, IDH1, ANKMY2, DDX46, MRPL40, RPA3, BLVRA
MOOTHA VOXPHOSNDUFS2, NDUFA6, CYC1
BENPORATH MYC MAX TARGETS
LIN MELANOMA COPY NUMBER UP
JIANG HYPOXIA CANCER
PUJANA BRCA1 PCC NETWORK
DANG BOUND BY MYC
BENPORATH CYCLING GENES
RAMALHO STEMNESS UP
REACTOME CELL CYCLE CHECKPOINTS
ALONSO METASTASIS UP
KUMAMOTO RESPONSE TO NUTLIN 3A DN
REACTOME ELECTRON TRANSPORT CHAIN
DING LUNG CANCER EXPRESSION BY COPY NUMBER
ZHAN MULTIPLE MYELOMA SUBGROUPS
BASSO B LYMPHOCYTE NETWORK
CORUM DNA SYNTHESOME COMPLEX 17 SUBUNITS
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 13
KEGG OXIDATIVE PHOSPHORYLATION
NCI PLK1 PATHWAY
CAFFAREL RESPONSE TO THC 24HR 5 UP
KEGG PARKINSONS DISEASE
SANA RESPONSE TO IFNG DN
BUYTAERT PHOTODYNAMIC THERAPY STRESS DN
HAHTOLA MYCOSIS FUNGOIDES CD4 DN
LEE LIVER CANCER SURVIVAL DN
NCI REPAIR SYNTHESIS FOR GAP FILLING BY DNA POLYMERASE IN TC NER
WONG MITOCHONDRIA GENE MODULE
GARY CD5 TARGETS DN
RICKMAN TUMOR DIFFERENTIATED WELL VS POORLY UP
ZHAN VARIABLE EARLY DIFFERENTIATION GENES DN
GRADE COLON AND RECTAL CANCER UP
FINETTI BREAST CANCER BASAL VS LUMINAL
WEST ADRENOCORTICAL TUMOR UP
NCI MITOTIC PROMETAPHASEKIF2C
REACTOME CHOLESTEROL BIOSYNTHESIS
PUJANA BREAST CANCER LIT INT NETWORK
MANN RESPONSE TO AMIFOSTINE DN
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
ZHONG RESPONSE TO AZACITIDINE AND TSA DN
REACTOME G1 S TRANSITION
CORUM DNA SYNTHESOME COMPLEX 13 SUBUNITS
MOHANKUMAR TLX1 TARGETS UP
REACTOME S PHASE
KEGG CELL CYCLE
FINETTI BREAST CANCER KINOME RED
FAELT B CLL WITH VH REARRANGEMENTS DN
MOREAUX MULTIPLE MYELOMA BY TACI DN
NUYTTEN NIPP1 TARGETS DN
OUELLET CULTURED OVARIAN CANCER INVASIVE VS LMP UP
REACTOME SYNTHESIS OF DNA
ACEVEDO LIVER CANCER UP
REACTOME PURINE RIBONUCLEOSIDE MONOPHOSPHATE BIOSYNTHESIS
KAUFFMANN DNA REPAIR GENES
REACTOME DNA REPLICATION PRE INITIATION
DODD NASOPHARYNGEAL CARCINOMA DN
MORI EMU MYC LYMPHOMA BY ONSET TIME UP
KEGG NUCLEOTIDE EXCISION REPAIR
Color legend
q-value-1-0.2-0.05-0.01-0.001-0.0001
Color
TABLE OF Q-VALUES
helicobacter pylori kx2 npgecburkholderia pseudomalleilactobacillus acidophiluspseudomonas aeruginosaporphyromonas gingivalishelicobacter pylori kx1 npgecGeneSet Name
-0.00489 -0.00532 -0.00129 -0.01279 -0.00366 -0.00733ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_UP
-0.00217 -0.00001 -0.00010 -0.07540 -0.00002 -0.00036MOOTHA_VOXPHOS
-0.00219 -0.00007 -0.01279 -0.08688 -0.02655 -0.01238BENPORATH_MYC_MAX_TARGETS
-0.06046 -0.06089 -0.08529 -0.18000 -0.19232 -0.15352LIN_MELANOMA_COPY_NUMBER_UP
-0.00238 -0.01791 -0.09610 -0.02512 -0.02459 -0.00082JIANG_HYPOXIA_CANCER
-0.04039 -0.00005 -0.00009 -0.01546 -0.02359 -0.03725PUJANA_BRCA1_PCC_NETWORK
-0.04463 -0.00207 -0.01007 -0.17910 -0.09746 -0.02924DANG_BOUND_BY_MYC
-0.02705 -0.00026 -0.00012 -0.01705 -0.13199 -0.01003BENPORATH_CYCLING_GENES
-0.02836 -0.12653 -0.00058 -0.00090 -0.03607 -0.01531RAMALHO_STEMNESS_UP
-0.00003 -0.02029 -0.00613 -0.00423 -0.00004 -0.00086REACTOME_CELL_CYCLE_CHECKPOINTS
-0.01661 -0.01842 -0.09912 -0.01131 -0.14187 -0.00963ALONSO_METASTASIS_UP
-0.04464 -0.00073 -0.00892 -0.07193 -0.07522 -0.08108KUMAMOTO_RESPONSE_TO_NUTLIN_3A_DN
-0.00115 -0.00001 -0.00013 -0.07078 -0.00001 -0.00039REACTOME_ELECTRON_TRANSPORT_CHAIN
-0.07293 -0.13481 -0.19751 -0.00113 -0.01809 -0.14078DING_LUNG_CANCER_EXPRESSION_BY_COPY_NUMBER
-0.03354 -0.00011 -0.00541 -0.19470 -0.08383 -0.01414ZHAN_MULTIPLE_MYELOMA_SUBGROUPS
-0.01977 -0.00245 -0.00401 -0.16721 -0.03873 -0.05536BASSO_B_LYMPHOCYTE_NETWORK
-0.06173 -0.00750 -0.00058 -0.07338 -0.10704 -0.02450CORUM_DNA_SYNTHESOME_COMPLEX_17_SUBUNITS
-0.00018 -0.00001 -0.00617 -0.15890 -0.00001 -0.00033YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_13
-0.02319 -0.00040 -0.02616 -0.04935 -0.00288 -0.00291KEGG_OXIDATIVE_PHOSPHORYLATION
-0.00213 -0.00005 -0.00001 -0.01327 -0.04287 -0.01899NCI_PLK1_PATHWAY
-0.11056 -0.02155 -0.02056 -0.14486 -0.05885 -0.01918CAFFAREL_RESPONSE_TO_THC_24HR_5_UP
-0.00236 -0.00001 -0.06903 -0.04469 -0.00196 -0.00043KEGG_PARKINSONS_DISEASE
-0.00979 -0.02533 -0.00201 -0.01466 -0.05467 -0.00182SANA_RESPONSE_TO_IFNG_DN
-0.00546 -0.00001 -0.00008 -0.03826 -0.17539 -0.00339BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_DN
-0.02754 -0.00001 -0.04832 -0.02319 -0.13697 -0.01416HAHTOLA_MYCOSIS_FUNGOIDES_CD4_DN
-0.00657 -0.00069 -0.00627 -0.00284 -0.12425 -0.00959LEE_LIVER_CANCER_SURVIVAL_DN
-0.01553 -0.00243 -0.00254 -0.18027 -0.10445 -0.05413NCI_REPAIR_SYNTHESIS_FOR_GAP_FILLING_BY_DNA_POLYMERASE_IN_TC_NER
-0.00182 -0.00046 -0.00183 -0.08070 -0.00002 -0.00100WONG_MITOCHONDRIA_GENE_MODULE
-0.04586 -0.07082 -0.00608 -0.01258 -0.00029 -0.10908GARY_CD5_TARGETS_DN
-0.04603 -0.01642 -0.06171 -0.00868 -0.07138 -0.03512RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_UP
-0.06031 -0.01575 -0.13352 -0.07862 -0.08387 -0.00951ZHAN_VARIABLE_EARLY_DIFFERENTIATION_GENES_DN
-0.05315 -0.00015 -0.00043 -0.07257 -0.01065 -0.05976GRADE_COLON_AND_RECTAL_CANCER_UP
-0.03351 -0.00016 -0.00058 -0.12915 -0.09172 -0.07930FINETTI_BREAST_CANCER_BASAL_VS_LUMINAL
-0.00769 -0.00115 -0.00173 -0.01510 -0.04057 -0.00298WEST_ADRENOCORTICAL_TUMOR_UP
-0.00583 -0.00002 -0.00003 -0.00094 -0.02882 -0.00299NCI_MITOTIC_PROMETAPHASE
-0.01585 -0.12827 -0.00604 -0.18726 -0.01829 -0.00080REACTOME_CHOLESTEROL_BIOSYNTHESIS
-0.02506 -0.00027 -0.00257 -0.19807 -0.18376 -0.15602PUJANA_BREAST_CANCER_LIT_INT_NETWORK
-0.15675 -0.01162 -0.09436 -0.14582 -0.19511 -0.05983MANN_RESPONSE_TO_AMIFOSTINE_DN
-0.00430 -0.00725 -0.00020 -0.02880 -0.00014 -0.00086STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
-0.01265 -0.00012 -0.01392 -0.10608 -0.00819 -0.03620ZHONG_RESPONSE_TO_AZACITIDINE_AND_TSA_DN
-0.00214 -0.04051 -0.00092 -0.05329 -0.00005 -0.00298REACTOME_G1_S_TRANSITION
-0.10675 -0.01432 -0.00268 -0.19900 -0.05256 -0.07647CORUM_DNA_SYNTHESOME_COMPLEX_13_SUBUNITS
-0.02038 -0.01445 -0.03991 -0.02157 -0.19488 -0.00718MOHANKUMAR_TLX1_TARGETS_UP
-0.00017 -0.01960 -0.00260 -0.10989 -0.00004 -0.00088REACTOME_S_PHASE
-0.00787 -0.00013 -0.00055 -0.00226 -0.10582 -0.00463KEGG_CELL_CYCLE
-0.02908 -0.00049 -0.00052 -0.09937 -0.15753 -0.07132FINETTI_BREAST_CANCER_KINOME_RED
-0.01320 -0.07192 -0.11692 -0.01766 -0.04856 -0.00762FAELT_B_CLL_WITH_VH_REARRANGEMENTS_DN
-0.10216 -0.00204 -0.01167 -0.01021 -0.00320 -0.04602MOREAUX_MULTIPLE_MYELOMA_BY_TACI_DN
-0.00740 -0.13553 -0.04825 -0.13346 -0.18750 -0.00278NUYTTEN_NIPP1_TARGETS_DN
-0.00920 -0.03184 -0.05717 -0.14610 -0.03580 -0.01296OUELLET_CULTURED_OVARIAN_CANCER_INVASIVE_VS_LMP_UP
-0.00016 -0.04929 -0.03098 -0.12476 -0.00002 -0.00059REACTOME_SYNTHESIS_OF_DNA
-0.00904 -0.05501 -0.13640 -0.00067 -0.06123 -0.01628ACEVEDO_LIVER_CANCER_UP
-0.06882 -0.12665 -0.00014 -0.03954 -0.08211 -0.17878REACTOME_PURINE_RIBONUCLEOSIDE_MONOPHOSPHATE_BIOSYNTHESIS
-0.09101 -0.00140 -0.00009 -0.04560 -0.03015 -0.06811KAUFFMANN_DNA_REPAIR_GENES
-0.00061 -0.18352 -0.01571 -0.08852 -0.00014 -0.00239REACTOME_DNA_REPLICATION_PRE_INITIATION
-0.03870 -0.00001 -0.00002 -0.00288 -0.02277 -0.06590DODD_NASOPHARYNGEAL_CARCINOMA_DN
-0.09503 -0.00070 -0.02388 -0.04215 -0.19698 -0.09524MORI_EMU_MYC_LYMPHOMA_BY_ONSET_TIME_UP
-0.15205 -0.01443 -0.00448 -0.03758 -0.00290 -0.04356KEGG_NUCLEOTIDE_EXCISION_REPAIR