BICLUSTER_ID : UPREG-134
PATHOGENS /8/ : escherichia coli,lactobacillus acidophilus,helicobacter pylori,listeria monocytogenes,bifidobacterium bifidum,yersinia enterocolitica,mycobacterium tuberculosis,ehrlichia chaffeensis
TARGETS /1/ : TNF
Gene SetLeading Edge Genes
NETPATH IL 2 PATHWAY UPTNF
KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL UP
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 UP
BIOCARTA PML PATHWAY
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING UP
NETPATH IL 3 PATHWAY UP
NAKAYAMA SOFT TISSUE TUMORS PCA1 UP
KEGG GRAFT VERSUS HOST DISEASE
MCLACHLAN DENTAL CARIES UP
ICHIBA GRAFT VERSUS HOST DISEASE D7 UP
NETPATH IL 5 PATHWAY UP
MCLACHLAN DENTAL CARIES DN
RASHI RESPONSE TO IONIZING RADIATION 2
KEGG ALLOGRAFT REJECTION
AMIT SERUM RESPONSE 40 MCF10A
SEKI INFLAMMATORY RESPONSE LPS UP
GAURNIER PSMD4 TARGETS
WALLACE PROSTATE CANCER RACE UP
HELLER SILENCED BY METHYLATION UP
FARMER BREAST CANCER CLUSTER 1
GRAHAM CML QUIESCENT VS CML DIVIDING UP
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP
HORIUCHI WTAP TARGETS UP
ICHIBA GRAFT VERSUS HOST DISEASE 35D UP
SMID BREAST CANCER LUMINAL B DN
NETPATH IL 7 PATHWAY UP
SANA TNF SIGNALING UP
NETPATH IL 4 PATHWAY DOWNCXCL2
FOSTER INFLAMMATORY RESPONSE LPS UP
RUTELLA RESPONSE TO CSF2RB AND IL4 DN
KEGG HEMATOPOIETIC CELL LINEAGE
SATO SILENCED BY METHYLATION IN PANCREATIC CANCER 2
VERHAAK AML WITH NPM1 MUTATED UP
GRAHAM CML DIVIDING VS NORMAL QUIESCENT DN
MARKEY RB1 ACUTE LOF UP
BASSO CD40 SIGNALING UP
NCI IL12 2PATHWAY
TIAN TNF SIGNALING VIA NFKB
KEGG TOLL LIKE RECEPTOR SIGNALING PATHWAY
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL DN
LU IL4 SIGNALING
MAHADEVAN RESPONSE TO MP470 UP
RUTELLA RESPONSE TO HGF UP
LIU VAV3 PROSTATE CARCINOGENESIS UP
KEGG AUTOIMMUNE THYROID DISEASE
FERRARI RESPONSE TO FENRETINIDE UP
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica wap bcyersinia enterocolitica p60 bl6yersinia enterocolitica p60 bclactobacillus acidophiluslisteria monocytogenesbifidobacterium bifidumehrlichia chaffeensis libertyehrlichia chaffeensis arkansaehrlichia chaffeensis wakullamycobacterium tuberculosisescherichia colihelicobacter pyloriGeneSet Name
0.00010 0.00994 0.00018 0.01173 0.00068 0.07512 0.01786 0.00029 0.00006 0.00008 0.00000 0.02714NETPATH_IL_2_PATHWAY_UP
0.00001 0.00000 0.00000 0.00000 0.02915 0.00000 0.00077 0.00000 0.00000 0.00225 0.00000 0.01320KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION
0.00000 0.00000 0.00000 0.00598 0.00001 0.01391 0.09755 0.00488 0.00301 0.00000 0.00000 0.06395OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP
0.00121 0.06839 0.05249 0.12763 0.00000 0.08197 0.00908 0.00123 0.00006 0.00000 0.01985 0.06401RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP
0.05475 0.19301 0.02683 0.01418 0.00624 0.04511 0.13171 0.01308 0.00285 0.02320 0.01149 0.06304BIOCARTA_PML_PATHWAY
0.00000 0.00021 0.00000 0.00008 0.00023 0.00214 0.01105 0.00021 0.00547 0.00002 0.00000 0.01575GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.00000 0.00000 0.00000 0.00372 0.00553 0.01084 0.00030 0.00000 0.00000 0.00171 0.00000 0.15967NETPATH_IL_3_PATHWAY_UP
0.10223 0.02528 0.08621 0.01636 0.00001 0.13644 0.00000 0.00000 0.00000 0.00000 0.04537 0.13518NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP
0.00024 0.00069 0.00055 0.00180 0.00003 0.00101 0.00002 0.00000 0.00000 0.02321 0.00002 0.16793KEGG_GRAFT_VERSUS_HOST_DISEASE
0.00000 0.00050 0.00008 0.00667 0.00000 0.00155 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000MCLACHLAN_DENTAL_CARIES_UP
0.00000 0.00011 0.00000 0.00000 0.00001 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.01211ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7_UP
0.00001 0.00711 0.00159 0.01533 0.00007 0.11144 0.05924 0.00007 0.00000 0.00000 0.00001 0.03211NETPATH_IL_5_PATHWAY_UP
0.00001 0.00065 0.00014 0.01242 0.00000 0.00444 0.00000 0.00000 0.00000 0.00001 0.00002 0.00000MCLACHLAN_DENTAL_CARIES_DN
0.00001 0.00297 0.00008 0.00034 0.04054 0.00098 0.09956 0.00307 0.00001 0.00000 0.00000 0.15090RASHI_RESPONSE_TO_IONIZING_RADIATION_2
0.00070 0.00288 0.01133 0.00026 0.00001 0.00011 0.00019 0.00009 0.00014 0.00549 0.00000 0.02721KEGG_ALLOGRAFT_REJECTION
0.00000 0.00000 0.00004 0.00031 0.00799 0.01845 0.03677 0.00705 0.00005 0.00000 0.00142 0.17677AMIT_SERUM_RESPONSE_40_MCF10A
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00826SEKI_INFLAMMATORY_RESPONSE_LPS_UP
0.00000 0.00000 0.00000 0.00000 0.00001 0.00007 0.00000 0.00000 0.00000 0.00000 0.00000 0.00123GAURNIER_PSMD4_TARGETS
0.00000 0.00029 0.00000 0.00000 0.00031 0.00167 0.00000 0.00000 0.00000 0.00000 0.00004 0.00000WALLACE_PROSTATE_CANCER_RACE_UP
0.00040 0.00251 0.00028 0.00489 0.07324 0.02743 0.00000 0.00000 0.00000 0.00000 0.00002 0.00668HELLER_SILENCED_BY_METHYLATION_UP
0.01810 0.00711 0.00039 0.00000 0.00001 0.00019 0.00000 0.00000 0.00000 0.00000 0.00000 0.04805FARMER_BREAST_CANCER_CLUSTER_1
0.00008 0.00398 0.00030 0.00000 0.00097 0.00000 0.00022 0.00007 0.00003 0.00000 0.00000 0.07962GRAHAM_CML_QUIESCENT_VS_CML_DIVIDING_UP
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00059 0.00000 0.00000 0.00000 0.00000 0.12811ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP
0.00023 0.01137 0.00038 0.00495 0.01805 0.00296 0.01757 0.00147 0.00059 0.00000 0.00002 0.13802HORIUCHI_WTAP_TARGETS_UP
0.00008 0.00015 0.00218 0.00084 0.00011 0.00865 0.00000 0.00000 0.00000 0.00021 0.00769 0.00022ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35D_UP
0.00824 0.00018 0.00148 0.07352 0.12803 0.13028 0.00253 0.00000 0.00000 0.07952 0.00006 0.00142SMID_BREAST_CANCER_LUMINAL_B_DN
0.00052 0.00709 0.00028 0.06237 0.09197 0.01764 0.00005 0.00034 0.00004 0.00856 0.00000 0.06443NETPATH_IL_7_PATHWAY_UP
0.00000 0.00022 0.00000 0.00000 0.00000 0.00000 0.00008 0.00000 0.00000 0.00000 0.00000 0.02871SANA_TNF_SIGNALING_UP
0.00024 0.00146 0.00040 0.00012 0.00001 0.00103 0.00340 0.00001 0.00000 0.00000 0.00000 0.00844NETPATH_IL_4_PATHWAY_DOWN
0.00000 0.00004 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00011 0.03242FOSTER_INFLAMMATORY_RESPONSE_LPS_UP
0.00040 0.13271 0.04786 0.10725 0.00000 0.10663 0.00000 0.00000 0.00000 0.00000 0.12734 0.13865RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_DN
0.00344 0.00043 0.00057 0.02072 0.01434 0.03856 0.00000 0.00000 0.00000 0.11260 0.00021 0.06394KEGG_HEMATOPOIETIC_CELL_LINEAGE
0.05211 0.00019 0.00360 0.01605 0.12933 0.00313 0.09153 0.00029 0.00974 0.04041 0.03679 0.11188SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_2
0.00000 0.00000 0.00000 0.03043 0.00000 0.02011 0.00000 0.00000 0.00000 0.00000 0.00000 0.19207VERHAAK_AML_WITH_NPM1_MUTATED_UP
0.00011 0.00272 0.00007 0.00001 0.00032 0.00145 0.00118 0.00015 0.00030 0.00000 0.00000 0.00409GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_DN
0.00001 0.01647 0.00004 0.00000 0.00004 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.03172MARKEY_RB1_ACUTE_LOF_UP
0.00000 0.00018 0.00003 0.00000 0.00020 0.00006 0.00000 0.00000 0.00000 0.00000 0.00000 0.00046BASSO_CD40_SIGNALING_UP
0.00156 0.00272 0.00140 0.00000 0.04187 0.00033 0.00032 0.00000 0.00000 0.00051 0.00000 0.10271NCI_IL12_2PATHWAY
0.00000 0.00016 0.00000 0.00000 0.00054 0.00000 0.02222 0.00003 0.00000 0.00000 0.00000 0.02721TIAN_TNF_SIGNALING_VIA_NFKB
0.00177 0.01680 0.00219 0.00000 0.02242 0.00000 0.00866 0.00000 0.00000 0.00000 0.00000 0.15392KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY
0.00000 0.00000 0.00000 0.00475 0.00001 0.01525 0.10357 0.00511 0.00265 0.00000 0.00000 0.05967OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_DN
0.00006 0.00176 0.00004 0.00007 0.01517 0.01831 0.00508 0.00276 0.00009 0.02153 0.00649 0.14149LU_IL4_SIGNALING
0.00006 0.00018 0.00000 0.00272 0.00004 0.00318 0.00131 0.00029 0.00001 0.00004 0.00000 0.15994MAHADEVAN_RESPONSE_TO_MP470_UP
0.00232 0.04754 0.05386 0.03223 0.00007 0.05087 0.06352 0.01712 0.00473 0.00000 0.00005 0.02572RUTELLA_RESPONSE_TO_HGF_UP
0.11363 0.12805 0.08100 0.02070 0.01016 0.10808 0.00000 0.00000 0.00000 0.00067 0.00647 0.01222LIU_VAV3_PROSTATE_CARCINOGENESIS_UP
0.17971 0.01127 0.11422 0.00927 0.00296 0.00055 0.08016 0.01760 0.00607 0.00343 0.00009 0.05509KEGG_AUTOIMMUNE_THYROID_DISEASE
0.00007 0.01472 0.00050 0.15133 0.06128 0.05329 0.18558 0.00947 0.00156 0.00018 0.00016 0.03414FERRARI_RESPONSE_TO_FENRETINIDE_UP