BICLUSTER_ID : UPREG-354
PATHOGENS /2/ : streptococcus pneumoniae,aeromonas caviae
TARGETS /27/ : NDUFV2, SDHB, NDUFB8, NDUFV1, NDUFA11, NDUFB5, NDUFS1, PIM1, IFNAR2, NDUFA2, NDUFA8, UQCRC1, NDUFB3, STAT1, PET112L, NDUFS6, NDUFA9, NDUFS4, PDGFRA, NDUFA4, NDUFB6, NDUFS2, NDUFAB1, NDUFB2, NDUFA12, NDUFB10, NDUFC1
Gene SetLeading Edge Genes
CORUM RESPIRATORY CHAIN COMPLEX I HOLOENZYME MITOCHONDRIALNDUFV2, NDUFB8, NDUFV1, NDUFA11, NDUFB5, NDUFS1, NDUFA2, NDUFA8, NDUFB3, NDUFS6, NDUFA9, NDUFS4, NDUFS2, NDUFB6, NDUFA4, NDUFAB1, NDUFB2, NDUFB11, NDUFA12, NDUFB10, NDUFC1
MOOTHA VOXPHOSBCS1L, UQCR, NDUFB8, UQCRH, NDUFB5, UQCRFS1, NDUFS1, COX11, NDUFA8, NGFRAP1, UQCRC1, ATP5O, PET112L, NDUFS6, ATP5G1, NDUFS2, NDUFAB1, CKAP1, COX6C, NDUFB2, UQCRC2, ATP5F1, SURF1, NDUFC1, COX5A, SDHB, ATP5C1, NDUFA2, NDUFB3, NDUFA9, NDUFS4, NDUFA4, NDUFB6, COX7C, ATP5B
NETPATH IL 6 PATHWAY UPSTAT1, CXCL1, LOH11CR2A, CITED2, MAP3K8, PDGFRA, CDKN1B, NMI, ZFP36, STAT3, PIM1, FOS, IRF1, PRDM1
NCI TELOMERASEPATHWAYATM, MXD1, SAP30, MAX, IFNAR2, IRF1, SMG6
NETPATH IL 2 PATHWAYSTAT1, FOXO3A, STAT3, PIK3CB, NMI
NCI TCRCALCIUMPATHWAY
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING UP
MAHAJAN RESPONSE TO IL1A UP
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 0
MOOTHA HUMAN MITODB 6 2002
RUIZ TNC TARGETS UP
VARELA ZMPSTE24 TARGETS UP
TENEDINI MEGAKARYOCYTE MARKERS
LINDSTEDT DENDRITIC CELL MATURATION B
SHARMA PILOCYTIC ASTROCYTOMA LOCATION UP
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 10
LINDSTEDT DENDRITIC CELL MATURATION A
BOYLAN MULTIPLE MYELOMA D DN
KINSEY TARGETS OF EWSR1 FLII FUSION DN
WONG MITOCHONDRIA GENE MODULE
NETPATH IL 7 PATHWAY
LINDSTEDT DENDRITIC CELL MATURATION D
HORIUCHI WTAP TARGETS UP
NETPATH T CELL RECEPTOR PATHWAY DOWN
COATES MACROPHAGE M1 VS M2 UP
REACTOME GLUCOSE REGULATION OF INSULIN SECRETION
NETPATH IL 7 PATHWAY UP
NETPATH B CELL RECEPTOR PATHWAY
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 14
ST INTERFERON GAMMA PATHWAY
ZHANG ANTIVIRAL RESPONSE TO RIBAVIRIN UP
RUTELLA RESPONSE TO CSF2RB AND IL4 DN
CHIARADONNA NEOPLASTIC TRANSFORMATION KRAS CDC25 DN
BROWNE INTERFERON RESPONSIVE GENES
NCI IL6 7PATHWAY
RODRIGUES THYROID CARCINOMA POORLY DIFFERENTIATED UP
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 3D UP
GARGALOVIC RESPONSE TO OXIDIZED PHOSPHOLIPIDS GREY DN
TONKS TARGETS OF RUNX1 RUNX1T1 FUSION ERYTHROCYTE UP
FULCHER INFLAMMATORY RESPONSE LECTIN VS LPS DN
DER IFN BETA RESPONSE UP
MORI PRE BI LYMPHOCYTE DN
TURASHVILI BREAST DUCTAL CARCINOMA VS DUCTAL NORMAL DN
STARK PREFRONTAL CORTEX 22Q11 DELETION DN
ST TYPE I INTERFERON PATHWAY
HINATA NFKB TARGETS KERATINOCYTE UP
TIEN INTESTINE PROBIOTICS 24HR UP
GALI TP53 TARGETS APOPTOTIC UP
CAIRO HEPATOBLASTOMA CLASSES UP
MARKEY RB1 ACUTE LOF UP
BASSO CD40 SIGNALING UP
XU RESPONSE TO TRETINOIN AND NSC682994 UP
SOUCEK MYC TARGETS
NUYTTEN EZH2 TARGETS UP
SCHLOSSER MYC TARGETS REPRESSED BY SERUM
DUTTA APOPTOSIS VIA NFKB
DIRMEIER LMP1 RESPONSE EARLY
ZHAN MULTIPLE MYELOMA LB DN
SHAFFER IRF4 MULTIPLE MYELOMA PROGRAM
SANA RESPONSE TO IFNG UP
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 UP
DAUER STAT3 TARGETS UP
LIANG SILENCED BY METHYLATION 2
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 11
REACTOME ELECTRON TRANSPORT CHAIN
DER IFN ALPHA RESPONSE UP
NETPATH KIT RECEPTOR PATHWAY
RUTELLA RESPONSE TO HGF DN
KEGG OXIDATIVE PHOSPHORYLATION
HOSHIDA LIVER CANCER SUBCLASS S1
PELLICCIOTTA HDAC IN ANTIGEN PRESENTATION DN
KIM MYC AMPLIFICATION TARGETS DN
NETPATH IL 5 PATHWAY UP
SCHUHMACHER MYC TARGETS UP
LEE LIVER CANCER E2F1 UP
FOSTER INFLAMMATORY RESPONSE LPS DN
REACTOME INTEGRATION OF ENERGY METABOLISM
SEKI INFLAMMATORY RESPONSE LPS UP
HELLER SILENCED BY METHYLATION UP
MOOTHA MITOCHONDRIA
OSAWA TNF TARGETS
STEIN ESRRA TARGETS UP
PICCALUGA ANGIOIMMUNOBLASTIC LYMPHOMA UP
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP
GAUSSMANN MLL AF4 FUSION TARGETS F UP
SANA TNF SIGNALING UP
LEE DIFFERENTIATING T LYMPHOCYTE
SCHUETZ BREAST CANCER DUCTAL INVASIVE UP
BROWNE HCMV INFECTION 2HR UP
CORUM REL-MAP3K8-RELA-TNIP2-PAPOLA COMPLEX
BREDEMEYER RAG SIGNALING VIA ATM NOT VIA NFKB UP
CASTELLANO NRAS TARGETS UP
ODONNELL TARGETS OF MYC AND TFRC UP
VERHAAK AML WITH NPM1 MUTATED UP
REACTOME P75NTR SIGNALS VIA NFKB
WAMUNYOKOLI OVARIAN CANCER GRADES 1 2 DN
GEISS RESPONSE TO DSRNA UP
BIOCARTA IL7 PATHWAY
GRAHAM CML DIVIDING VS NORMAL QUIESCENT DN
STREICHER LSM1 TARGETS UP
JISON SICKLE CELL DISEASE UP
ZHAN MULTIPLE MYELOMA DN
CORUM 55S RIBOSOME MITOCHONDRIAL
ST TUMOR NECROSIS FACTOR PATHWAY
NCI VITAMINSCYP26A1, CYP26B1
CROONQUIST NRAS SIGNALING UP
HESS TARGETS OF HOXA9 AND MEIS1 DN
CORUM 28S RIBOSOMAL SUBUNIT MITOCHONDRIAL
OLSSON E2F3 TARGETS UP
WONG EMBRYONIC STEM CELL CORE
HUMMEL BURKITTS LYMPHOMA DN
NETPATH IL 2 PATHWAY UP
BIOCARTA IL2RB PATHWAY
GRAHAM CML QUIESCENT VS NORMAL DIVIDING UP
SOTIRIOU BREAST CANCER GRADE 1 VS 3 DN
NETPATH IL 4 PATHWAY
BERTUCCI MEDULLARY VS DUCTAL BREAST CANCER UP
NCI XANTHINE FORMATION
LEE EARLY T LYMPHOCYTE DN
MOOTHA PGC
HOSHIDA LIVER CANCER LATE RECURRENCE UP
BIOCARTA CASPASE PATHWAY
HUANG DASATINIB RESISTANCE UP
YAO TEMPORAL RESPONSE TO PROGESTERONE CLUSTER 17
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
streptococcus pneumoniae g54aeromonas caviaGeneSet Name
0.03328 0.00000CORUM_RESPIRATORY_CHAIN_COMPLEX_I_HOLOENZYME_MITOCHONDRIAL
0.05316 0.00000MOOTHA_VOXPHOS
0.01842 0.10211NETPATH_IL_6_PATHWAY_UP
0.01245 0.10807NCI_TELOMERASEPATHWAY
0.04610 0.05436NETPATH_IL_2_PATHWAY
0.15695 0.16624NCI_TCRCALCIUMPATHWAY
0.03257 0.01924GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.08911 0.16652MAHAJAN_RESPONSE_TO_IL1A_UP
0.00912 0.00084YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_0
0.16922 0.00000MOOTHA_HUMAN_MITODB_6_2002
0.00030 0.12368RUIZ_TNC_TARGETS_UP
0.01900 0.03175VARELA_ZMPSTE24_TARGETS_UP
0.11247 0.07889TENEDINI_MEGAKARYOCYTE_MARKERS
0.00817 0.00053LINDSTEDT_DENDRITIC_CELL_MATURATION_B
0.09853 0.05079SHARMA_PILOCYTIC_ASTROCYTOMA_LOCATION_UP
0.04938 0.00000YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_10
0.16372 0.00124LINDSTEDT_DENDRITIC_CELL_MATURATION_A
0.06977 0.10046BOYLAN_MULTIPLE_MYELOMA_D_DN
0.00396 0.12731KINSEY_TARGETS_OF_EWSR1_FLII_FUSION_DN
0.02432 0.00000WONG_MITOCHONDRIA_GENE_MODULE
0.15208 0.01572NETPATH_IL_7_PATHWAY
0.08206 0.15398LINDSTEDT_DENDRITIC_CELL_MATURATION_D
0.00695 0.12653HORIUCHI_WTAP_TARGETS_UP
0.09456 0.16575NETPATH_T_CELL_RECEPTOR_PATHWAY_DOWN
0.05358 0.04444COATES_MACROPHAGE_M1_VS_M2_UP
0.07640 0.00000REACTOME_GLUCOSE_REGULATION_OF_INSULIN_SECRETION
0.11486 0.16616NETPATH_IL_7_PATHWAY_UP
0.19416 0.13836NETPATH_B_CELL_RECEPTOR_PATHWAY
0.17082 0.00000YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_14
0.09655 0.13280ST_INTERFERON_GAMMA_PATHWAY
0.10354 0.02237ZHANG_ANTIVIRAL_RESPONSE_TO_RIBAVIRIN_UP
0.03089 0.02718RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_DN
0.02167 0.00603CHIARADONNA_NEOPLASTIC_TRANSFORMATION_KRAS_CDC25_DN
0.11107 0.00000BROWNE_INTERFERON_RESPONSIVE_GENES
0.10802 0.07318NCI_IL6_7PATHWAY
0.02406 0.00000RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP
0.08161 0.00000TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_3D_UP
0.03664 0.16621GARGALOVIC_RESPONSE_TO_OXIDIZED_PHOSPHOLIPIDS_GREY_DN
0.13995 0.16527TONKS_TARGETS_OF_RUNX1_RUNX1T1_FUSION_ERYTHROCYTE_UP
0.12500 0.00001FULCHER_INFLAMMATORY_RESPONSE_LECTIN_VS_LPS_DN
0.11870 0.00003DER_IFN_BETA_RESPONSE_UP
0.00687 0.00014MORI_PRE_BI_LYMPHOCYTE_DN
0.01840 0.13231TURASHVILI_BREAST_DUCTAL_CARCINOMA_VS_DUCTAL_NORMAL_DN
0.03839 0.00000STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN
0.04474 0.09960ST_TYPE_I_INTERFERON_PATHWAY
0.00568 0.06206HINATA_NFKB_TARGETS_KERATINOCYTE_UP
0.00438 0.00000TIEN_INTESTINE_PROBIOTICS_24HR_UP
0.11520 0.05625GALI_TP53_TARGETS_APOPTOTIC_UP
0.11487 0.00000CAIRO_HEPATOBLASTOMA_CLASSES_UP
0.10730 0.00000MARKEY_RB1_ACUTE_LOF_UP
0.03498 0.00110BASSO_CD40_SIGNALING_UP
0.13879 0.01774XU_RESPONSE_TO_TRETINOIN_AND_NSC682994_UP
0.08229 0.00169SOUCEK_MYC_TARGETS
0.00276 0.07444NUYTTEN_EZH2_TARGETS_UP
0.01918 0.00000SCHLOSSER_MYC_TARGETS_REPRESSED_BY_SERUM
0.05455 0.05340DUTTA_APOPTOSIS_VIA_NFKB
0.08905 0.00564DIRMEIER_LMP1_RESPONSE_EARLY
0.08960 0.00000ZHAN_MULTIPLE_MYELOMA_LB_DN
0.09034 0.14256SHAFFER_IRF4_MULTIPLE_MYELOMA_PROGRAM
0.15101 0.00000SANA_RESPONSE_TO_IFNG_UP
0.01828 0.11676RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP
0.03237 0.05120DAUER_STAT3_TARGETS_UP
0.01216 0.00001LIANG_SILENCED_BY_METHYLATION_2
0.05311 0.00000YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_11
0.02389 0.00000REACTOME_ELECTRON_TRANSPORT_CHAIN
0.11860 0.00000DER_IFN_ALPHA_RESPONSE_UP
0.10688 0.19470NETPATH_KIT_RECEPTOR_PATHWAY
0.00674 0.04351RUTELLA_RESPONSE_TO_HGF_DN
0.07632 0.00000KEGG_OXIDATIVE_PHOSPHORYLATION
0.08375 0.09158HOSHIDA_LIVER_CANCER_SUBCLASS_S1
0.04093 0.03029PELLICCIOTTA_HDAC_IN_ANTIGEN_PRESENTATION_DN
0.05295 0.08351KIM_MYC_AMPLIFICATION_TARGETS_DN
0.07746 0.07327NETPATH_IL_5_PATHWAY_UP
0.03113 0.00000SCHUHMACHER_MYC_TARGETS_UP
0.05639 0.01675LEE_LIVER_CANCER_E2F1_UP
0.01680 0.00001FOSTER_INFLAMMATORY_RESPONSE_LPS_DN
0.18676 0.00000REACTOME_INTEGRATION_OF_ENERGY_METABOLISM
0.02093 0.00002SEKI_INFLAMMATORY_RESPONSE_LPS_UP
0.17361 0.00206HELLER_SILENCED_BY_METHYLATION_UP
0.12552 0.00000MOOTHA_MITOCHONDRIA
0.00719 0.12830OSAWA_TNF_TARGETS
0.03164 0.00000STEIN_ESRRA_TARGETS_UP
0.09361 0.04189PICCALUGA_ANGIOIMMUNOBLASTIC_LYMPHOMA_UP
0.00231 0.00001ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP
0.01834 0.11464GAUSSMANN_MLL_AF4_FUSION_TARGETS_F_UP
0.15203 0.00000SANA_TNF_SIGNALING_UP
0.18334 0.00751LEE_DIFFERENTIATING_T_LYMPHOCYTE
0.13731 0.10206SCHUETZ_BREAST_CANCER_DUCTAL_INVASIVE_UP
0.04469 0.05963BROWNE_HCMV_INFECTION_2HR_UP
0.08343 0.01112CORUM_REL-MAP3K8-RELA-TNIP2-PAPOLA_COMPLEX
0.03113 0.13880BREDEMEYER_RAG_SIGNALING_VIA_ATM_NOT_VIA_NFKB_UP
0.11522 0.02086CASTELLANO_NRAS_TARGETS_UP
0.19023 0.13045ODONNELL_TARGETS_OF_MYC_AND_TFRC_UP
0.12533 0.08932VERHAAK_AML_WITH_NPM1_MUTATED_UP
0.13024 0.15842REACTOME_P75NTR_SIGNALS_VIA_NFKB
0.05027 0.07720WAMUNYOKOLI_OVARIAN_CANCER_GRADES_1_2_DN
0.03258 0.00364GEISS_RESPONSE_TO_DSRNA_UP
0.09084 0.00748BIOCARTA_IL7_PATHWAY
0.03598 0.00399GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_DN
0.09237 0.00691STREICHER_LSM1_TARGETS_UP
0.04179 0.00632JISON_SICKLE_CELL_DISEASE_UP
0.10196 0.04491ZHAN_MULTIPLE_MYELOMA_DN
0.06665 0.00000CORUM_55S_RIBOSOME_MITOCHONDRIAL
0.10551 0.11624ST_TUMOR_NECROSIS_FACTOR_PATHWAY
0.02041 0.08975NCI_VITAMINS
0.17404 0.05948CROONQUIST_NRAS_SIGNALING_UP
0.13868 0.01035HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN
0.04928 0.00000CORUM_28S_RIBOSOMAL_SUBUNIT_MITOCHONDRIAL
0.06115 0.03375OLSSON_E2F3_TARGETS_UP
0.18309 0.00000WONG_EMBRYONIC_STEM_CELL_CORE
0.05491 0.11042HUMMEL_BURKITTS_LYMPHOMA_DN
0.16635 0.07215NETPATH_IL_2_PATHWAY_UP
0.01752 0.07633BIOCARTA_IL2RB_PATHWAY
0.03864 0.09323GRAHAM_CML_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.00232 0.13249SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_DN
0.07835 0.12658NETPATH_IL_4_PATHWAY
0.10106 0.00108BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_UP
0.19352 0.07666NCI_XANTHINE_FORMATION
0.06967 0.18592LEE_EARLY_T_LYMPHOCYTE_DN
0.09036 0.00000MOOTHA_PGC
0.06801 0.09619HOSHIDA_LIVER_CANCER_LATE_RECURRENCE_UP
0.07295 0.02248BIOCARTA_CASPASE_PATHWAY
0.00242 0.15881HUANG_DASATINIB_RESISTANCE_UP
0.09030 0.00000YAO_TEMPORAL_RESPONSE_TO_PROGESTERONE_CLUSTER_17