BICLUSTER_ID : UPREG-398
PATHOGENS /3/ : bifidobacterium bifidum,yersinia enterocolitica,helicobacter pylori
TARGETS /2/ : CD86, TNF
Gene SetLeading Edge Genes
NETPATH IL 3 PATHWAY UPSOCS3, CD86, TNF
NETPATH IL 4 PATHWAY DOWNIRF1, CXCL2, TNF
NETPATH IL 7 PATHWAY UPCXCL5, CXCL1, CD86, CXCL2
NETPATH IL 2 PATHWAY UPSOCS3, IL4R, PBEF1, IRF1, TNF
KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL UP
BIOCARTA PML PATHWAY
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING UP
KEGG GRAFT VERSUS HOST DISEASE
REACTOME CLASS A1 RHODOPSIN LIKE RECEPTORS
KEGG ASTHMA
AUJLA IL22 AND IL17A SIGNALING
ICHIBA GRAFT VERSUS HOST DISEASE D7 UP
REACTOME PEPTIDE LIGAND BINDING RECEPTORS
RASHI RESPONSE TO IONIZING RADIATION 2
WALLACE PROSTATE CANCER RACE UP
HORIUCHI WTAP TARGETS UP
BIOCARTA NKT PATHWAY
RUTELLA RESPONSE TO CSF2RB AND IL4 DN
BIOCARTA LAIR PATHWAY
RUTELLA RESPONSE TO CSF2RB AND IL4 UP
DIRMEIER LMP1 RESPONSE LATE UP
MARKEY RB1 ACUTE LOF UP
BASSO CD40 SIGNALING UP
BIOCARTA DC PATHWAY
PAL PRMT5 TARGETS DN
MAHADEVAN RESPONSE TO MP470 UP
KEGG INTESTINAL IMMUNE NETWORK FOR IGA PRODUCTION
SMID BREAST CANCER NORMAL LIKE UP
LIU VAV3 PROSTATE CARCINOGENESIS UP
KEGG AUTOIMMUNE THYROID DISEASE
GOLDRATH ANTIGEN RESPONSE
REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES
FERRARI RESPONSE TO FENRETINIDE UP
CADWELL ATG16L1 TARGETS UP
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 DN
RUTELLA RESPONSE TO HGF VS CSF2RB AND IL4 UP
NAKAYAMA SOFT TISSUE TUMORS PCA1 UP
LIAN LIPA TARGETS 6M
MCLACHLAN DENTAL CARIES UP
BOYLAN MULTIPLE MYELOMA PCA1 UP
NETPATH IL 5 PATHWAY UP
MCLACHLAN DENTAL CARIES DN
KEGG ALLOGRAFT REJECTION
AMIT SERUM RESPONSE 40 MCF10A
SEKI INFLAMMATORY RESPONSE LPS UP
GAURNIER PSMD4 TARGETS
HELLER SILENCED BY METHYLATION UP
FARMER BREAST CANCER CLUSTER 1
GRAHAM CML QUIESCENT VS CML DIVIDING UP
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP
ICHIBA GRAFT VERSUS HOST DISEASE 35D UP
SMID BREAST CANCER LUMINAL B DN
SANA TNF SIGNALING UP
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 3D DN
FOSTER INFLAMMATORY RESPONSE LPS UP
KEGG HEMATOPOIETIC CELL LINEAGE
SATO SILENCED BY METHYLATION IN PANCREATIC CANCER 2
VERHAAK AML WITH NPM1 MUTATED UP
REACTOME G ALPHA I SIGNALLING EVENTS
GRAHAM CML DIVIDING VS NORMAL QUIESCENT DN
BIOCARTA GRANULOCYTES PATHWAY
NCI IL12 2PATHWAY
TIAN TNF SIGNALING VIA NFKB
REACTOME GPCR LIGAND BINDING
KEGG TOLL LIKE RECEPTOR SIGNALING PATHWAY
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL DN
LU IL4 SIGNALING
BERTUCCI MEDULLARY VS DUCTAL BREAST CANCER UP
RUTELLA RESPONSE TO HGF UP
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica p60 bl6bifidobacterium bifidumhelicobacter pyloriGeneSet Name
0.00000 0.01084 0.15967NETPATH_IL_3_PATHWAY_UP
0.00146 0.00103 0.00844NETPATH_IL_4_PATHWAY_DOWN
0.00709 0.01764 0.06443NETPATH_IL_7_PATHWAY_UP
0.00994 0.07512 0.02714NETPATH_IL_2_PATHWAY_UP
0.00000 0.00000 0.01320KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION
0.00000 0.01391 0.06395OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP
0.19301 0.04511 0.06304BIOCARTA_PML_PATHWAY
0.00021 0.00214 0.01575GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.00069 0.00101 0.16793KEGG_GRAFT_VERSUS_HOST_DISEASE
0.00794 0.05369 0.01598REACTOME_CLASS_A1_RHODOPSIN_LIKE_RECEPTORS
0.02752 0.00982 0.13902KEGG_ASTHMA
0.00953 0.00419 0.12378AUJLA_IL22_AND_IL17A_SIGNALING
0.00011 0.00000 0.01211ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7_UP
0.00054 0.01762 0.03448REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS
0.00297 0.00098 0.15090RASHI_RESPONSE_TO_IONIZING_RADIATION_2
0.00029 0.00167 0.00000WALLACE_PROSTATE_CANCER_RACE_UP
0.01137 0.00296 0.13802HORIUCHI_WTAP_TARGETS_UP
0.13260 0.03302 0.09183BIOCARTA_NKT_PATHWAY
0.13271 0.10663 0.13865RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_DN
0.00330 0.01086 0.00998BIOCARTA_LAIR_PATHWAY
0.06848 0.10892 0.10621RUTELLA_RESPONSE_TO_CSF2RB_AND_IL4_UP
0.00164 0.10056 0.10819DIRMEIER_LMP1_RESPONSE_LATE_UP
0.01647 0.00000 0.03172MARKEY_RB1_ACUTE_LOF_UP
0.00018 0.00006 0.00046BASSO_CD40_SIGNALING_UP
0.04231 0.00573 0.06449BIOCARTA_DC_PATHWAY
0.05425 0.01306 0.15995PAL_PRMT5_TARGETS_DN
0.00018 0.00318 0.15994MAHADEVAN_RESPONSE_TO_MP470_UP
0.13918 0.00179 0.04674KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION
0.01677 0.17152 0.00012SMID_BREAST_CANCER_NORMAL_LIKE_UP
0.12805 0.10808 0.01222LIU_VAV3_PROSTATE_CARCINOGENESIS_UP
0.01127 0.00055 0.05509KEGG_AUTOIMMUNE_THYROID_DISEASE
0.19042 0.00000 0.01292GOLDRATH_ANTIGEN_RESPONSE
0.00012 0.00006 0.00967REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES
0.01472 0.05329 0.03414FERRARI_RESPONSE_TO_FENRETINIDE_UP
0.04238 0.00063 0.06398CADWELL_ATG16L1_TARGETS_UP
0.14315 0.17262 0.15939RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_DN
0.06839 0.08197 0.06401RUTELLA_RESPONSE_TO_HGF_VS_CSF2RB_AND_IL4_UP
0.02528 0.13644 0.13518NAKAYAMA_SOFT_TISSUE_TUMORS_PCA1_UP
0.00177 0.04912 0.13986LIAN_LIPA_TARGETS_6M
0.00050 0.00155 0.00000MCLACHLAN_DENTAL_CARIES_UP
0.00219 0.11977 0.08203BOYLAN_MULTIPLE_MYELOMA_PCA1_UP
0.00711 0.11144 0.03211NETPATH_IL_5_PATHWAY_UP
0.00065 0.00444 0.00000MCLACHLAN_DENTAL_CARIES_DN
0.00288 0.00011 0.02721KEGG_ALLOGRAFT_REJECTION
0.00000 0.01845 0.17677AMIT_SERUM_RESPONSE_40_MCF10A
0.00000 0.00000 0.00826SEKI_INFLAMMATORY_RESPONSE_LPS_UP
0.00000 0.00007 0.00123GAURNIER_PSMD4_TARGETS
0.00251 0.02743 0.00668HELLER_SILENCED_BY_METHYLATION_UP
0.00711 0.00019 0.04805FARMER_BREAST_CANCER_CLUSTER_1
0.00398 0.00000 0.07962GRAHAM_CML_QUIESCENT_VS_CML_DIVIDING_UP
0.00000 0.00000 0.12811ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP
0.00015 0.00865 0.00022ICHIBA_GRAFT_VERSUS_HOST_DISEASE_35D_UP
0.00018 0.13028 0.00142SMID_BREAST_CANCER_LUMINAL_B_DN
0.00022 0.00000 0.02871SANA_TNF_SIGNALING_UP
0.10800 0.02366 0.14547TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_3D_DN
0.00004 0.00000 0.03242FOSTER_INFLAMMATORY_RESPONSE_LPS_UP
0.00043 0.03856 0.06394KEGG_HEMATOPOIETIC_CELL_LINEAGE
0.00019 0.00313 0.11188SATO_SILENCED_BY_METHYLATION_IN_PANCREATIC_CANCER_2
0.00000 0.02011 0.19207VERHAAK_AML_WITH_NPM1_MUTATED_UP
0.01582 0.09003 0.00115REACTOME_G_ALPHA_I_SIGNALLING_EVENTS
0.00272 0.00145 0.00409GRAHAM_CML_DIVIDING_VS_NORMAL_QUIESCENT_DN
0.01449 0.01849 0.03459BIOCARTA_GRANULOCYTES_PATHWAY
0.00272 0.00033 0.10271NCI_IL12_2PATHWAY
0.00016 0.00000 0.02721TIAN_TNF_SIGNALING_VIA_NFKB
0.01873 0.07753 0.08093REACTOME_GPCR_LIGAND_BINDING
0.01680 0.00000 0.15392KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY
0.00000 0.01525 0.05967OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_DN
0.00176 0.01831 0.14149LU_IL4_SIGNALING
0.18489 0.11780 0.00012BERTUCCI_MEDULLARY_VS_DUCTAL_BREAST_CANCER_UP
0.04754 0.05087 0.02572RUTELLA_RESPONSE_TO_HGF_UP