BICLUSTER_ID : UPREG-418
PATHOGENS /3/ : listeria monocytogenes,escherichia coli,streptococcus gordonii
TARGETS /5/ : S100A11, MMP3, IFNB1, IL8, TNFRSF1B
Gene SetLeading Edge Genes
NETPATH TNF ALPHA PATHWAY UPRND1, INADL, MT1E, TNFRSF1B, TMSB10, PMAIP1, NFKBIA, THPO, PDCD5, CSF2, MT1H, APOL3, EMP3, S100A11, IFITM1, PPP1R15A, TNFSF10, VRK2, MMP3, IFNB1, IFITM3, IL8, DUSP1
NOJIMA SFRP2 TARGETS UP
GRADE METASTASIS DN
NCI FORMATION OF A POOL OF FREE 40S SUBUNITSRPL10, RPS15A, RPS11, RPS18, RPL23A, RPLP1, RPL38, RPS10, RPS14, RPS21, RPS5, RPS16, RPS9, RPL13, RPS23, RPS19, RPS12, RPL30, UBA52, RPL9, RPS13, RPS29, RPS2, RPL39, RPL8, RPL37, RPS24, RPS15, RPL10A, RPL41
NCI HOST INTERACTIONS OF HIV FACTORS
NCI GTP HYDROLYSIS AND JOINING OF THE 60S RIBOSOMAL SUBUNIT
AMIT EGF RESPONSE 40 HELA
MAHADEVAN RESPONSE TO MP470 DN
NCI SCF SKP2 MEDIATED DEGRADATION OF P27 P21
CORUM 40S RIBOSOMAL SUBUNIT CYTOPLASMICRPS15A, RPS11, RPS18, RPS29, RPS13, RPS2, RPS14, RPS5, RPS21, RPS16, RPS24, RPS15, RPS9, RPS23, RPS19
REACTOME GTP HYDROLYSIS AND JOINING OF THE 60S RIBOSOMAL SUBUNIT
AMIT EGF RESPONSE 20 HELA
DAZARD UV RESPONSE CLUSTER G3
ENK UV RESPONSE KERATINOCYTE UP
TIAN TNF SIGNALING NOT VIA NFKB
REACTOME TRANSLATION INITIATION COMPLEX FORMATION
BIOCARTA DC PATHWAY
CORUM RIBOSOME CYTOPLASMICRPL10, RPS15A, RPS11, RPS18, RPL23A, RPLP1, RPL38, RPS10, RPS14, RPS21, RPS5, RPS16, RPS9, RPL13, RPS23, RPS19, RPS12, RPL30, RPL9, RPS13, RPS29, RPS2, RPL39, RPL8, RPL37, RPS24, RPS15, RPL10A, RPL41
DIRMEIER LMP1 RESPONSE EARLY
KEGG INTESTINAL IMMUNE NETWORK FOR IGA PRODUCTION
NCI VPU MEDIATED DEGRADATION OF CD4
NCI L13A MEDIATED TRANSLATIONAL SILENCING OF CERULOPLASMIN EXPRESSION
NCI NFAT TFPATHWAY
AMIT EGF RESPONSE 120 HELA
REACTOME VIF MEDIATED DEGRADATION OF APOBEC3G
SEIDEN ONCOGENESIS BY MET
MARTINEZ RESPONSE TO TRABECTEDIN UP
REACTOME PEPTIDE CHAIN ELONGATION
AMIT EGF RESPONSE 60 HELA
ADDYA ERYTHROID DIFFERENTIATION BY HEMIN
DIRMEIER LMP1 RESPONSE LATE DN
CHEN HOXA5 TARGETS 9HR UP
PELLICCIOTTA HDAC IN ANTIGEN PRESENTATION DN
NCI VIRAL MRNA TRANSLATIONRPL10, RPS15A, RPS11, RPS18, RPL23A, RPLP1, RPL38, RPS10, RPS14, RPS21, RPS5, RPS16, RPS9, RPL13, RPS23, RPS19, RPS12, RPL30, UBA52, RPL9, RPS13, RPS29, RPS2, RPL39, RPL8, RPL37, RPS24, RPS15, RPL10A, RPL41
KEGG ALLOGRAFT REJECTION
REACTOME VIRAL MRNA TRANSLATION
AMIT SERUM RESPONSE 40 MCF10A
REACTOME P53 INDEPENDENT DNA DAMAGE RESPONSE
REACTOME REGULATION OF GENE EXPRESSION IN BETA CELLS
NCI CAP DEPENDENT TRANSLATION INITIATION
NCI EUKARYOTIC TRANSLATION TERMINATIONRPL10, RPS15A, RPS11, RPS18, RPL23A, RPLP1, RPL38, RPS10, RPS14, RPS21, RPS5, RPS16, RPS9, RPL13, RPS23, RPS19, RPS12, RPL30, UBA52, RPL9, RPS13, RPS29, RPS2, RPL39, RPL8, RPL37, RPS24, RPS15, RPL10A, RPL41
NCI PEPTIDE CHAIN ELONGATIONRPL10, RPS15A, RPS11, RPS18, RPL23A, RPLP1, RPL38, RPS10, RPS14, RPS21, RPS5, RPS16, RPS9, RPL13, RPS23, RPS19, RPS12, EEF1A1, RPL30, UBA52, RPL9, RPS13, RPS29, RPS2, RPL39, RPL8, RPL37, RPS24, RPS15, RPL10A, RPL41
BUYTAERT PHOTODYNAMIC THERAPY STRESS UP
NCI FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEXRPS15A, RPS11, RPS18, RPS29, RPS13, RPS2, RPS14, RPS5, RPS21, RPS16, RPS24, RPS15, RPS9, RPS23, RPS19
NCI UBIQUITIN DEPENDENT DEGRADATION OF CYCLIN D1
REACTOME FORMATION OF THE TERNARY COMPLEX AND SUBSEQUENTLY THE 43S COMPLEX
BROWNE HCMV INFECTION 2HR UP
RODWELL AGING KIDNEY UP
SENESE HDAC1 TARGETS UP
KEGG RIBOSOME
BUDHU LIVER CANCER METASTASIS UP
NCI RIBOSOMAL SCANNING AND START CODON RECOGNITION
ONDER CDH1 TARGETS 1 DN
UZONYI RESPONSE TO LEUKOTRIENE AND THROMBIN
HESS TARGETS OF HOXA9 AND MEIS1 DN
REACTOME REGULATION OF BETA CELL DEVELOPMENT
NCI SCF BETA TRCP MEDIATED DEGRADATION OF EMI1
KEGG PROTEASOME
NCI REGULATION OF ACTIVATED PAK 2P34 BY PROTEASOME MEDIATED DEGRADATION1
NCI VIF MEDIATED DEGRADATION OF APOBEC3G
REACTOME FORMATION OF A POOL OF FREE 40S SUBUNITS
BIOCARTA IL3 PATHWAY
NCI DEGRADATION OF BETA CATENIN BY THE DESTRUCTION COMPLEX
NCI REGULATION OF ACTIVATED PAK 2P34 BY PROTEASOME MEDIATED DEGRADATION
NCI UBIQUITIN MEDIATED DEGRADATION OF PHOSPHORYLATED CDC25A
HEDENFALK BREAST CANCER BRACX UP
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
streptococcus gordoniilisteria monocytogenesescherichia coliGeneSet Name
0.09153 0.00123 0.00001NETPATH_TNF_ALPHA_PATHWAY_UP
0.11488 0.02668 0.00018NOJIMA_SFRP2_TARGETS_UP
0.07438 0.01744 0.05569GRADE_METASTASIS_DN
0.00000 0.00061 0.00702NCI_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS
0.04140 0.00045 0.08644NCI_HOST_INTERACTIONS_OF_HIV_FACTORS
0.00000 0.00100 0.04260NCI_GTP_HYDROLYSIS_AND_JOINING_OF_THE_60S_RIBOSOMAL_SUBUNIT
0.12762 0.00068 0.00000AMIT_EGF_RESPONSE_40_HELA
0.01276 0.01146 0.00317MAHADEVAN_RESPONSE_TO_MP470_DN
0.04713 0.00110 0.09524NCI_SCF_SKP2__MEDIATED_DEGRADATION_OF_P27_P21
0.00068 0.00200 0.00618CORUM_40S_RIBOSOMAL_SUBUNIT_CYTOPLASMIC
0.00000 0.00127 0.05775REACTOME_GTP_HYDROLYSIS_AND_JOINING_OF_THE_60S_RIBOSOMAL_SUBUNIT
0.00325 0.02894 0.00089AMIT_EGF_RESPONSE_20_HELA
0.04761 0.00837 0.00510DAZARD_UV_RESPONSE_CLUSTER_G3
0.00354 0.00904 0.01710ENK_UV_RESPONSE_KERATINOCYTE_UP
0.16748 0.01298 0.00702TIAN_TNF_SIGNALING_NOT_VIA_NFKB
0.00994 0.00554 0.17917REACTOME_TRANSLATION_INITIATION_COMPLEX_FORMATION
0.17857 0.00005 0.00672BIOCARTA_DC_PATHWAY
0.00000 0.00123 0.00802CORUM_RIBOSOME_CYTOPLASMIC
0.11081 0.00199 0.00000DIRMEIER_LMP1_RESPONSE_EARLY
0.17403 0.00181 0.00010KEGG_INTESTINAL_IMMUNE_NETWORK_FOR_IGA_PRODUCTION
0.06073 0.00119 0.13037NCI_VPU_MEDIATED_DEGRADATION_OF_CD4
0.00000 0.00108 0.08214NCI_L13A_MEDIATED_TRANSLATIONAL_SILENCING_OF_CERULOPLASMIN_EXPRESSION
0.00535 0.05773 0.00004NCI_NFAT_TFPATHWAY
0.00000 0.02592 0.00046AMIT_EGF_RESPONSE_120_HELA
0.15788 0.00069 0.04833REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
0.00000 0.05109 0.14798SEIDEN_ONCOGENESIS_BY_MET
0.01363 0.00555 0.02354MARTINEZ_RESPONSE_TO_TRABECTEDIN_UP
0.00000 0.00119 0.00626REACTOME_PEPTIDE_CHAIN_ELONGATION
0.00000 0.02795 0.00523AMIT_EGF_RESPONSE_60_HELA
0.15668 0.03814 0.08973ADDYA_ERYTHROID_DIFFERENTIATION_BY_HEMIN
0.00051 0.17958 0.06500DIRMEIER_LMP1_RESPONSE_LATE_DN
0.00000 0.00000 0.00050CHEN_HOXA5_TARGETS_9HR_UP
0.05407 0.00306 0.09136PELLICCIOTTA_HDAC_IN_ANTIGEN_PRESENTATION_DN
0.00000 0.00228 0.01461NCI_VIRAL_MRNA_TRANSLATION
0.15904 0.00001 0.00000KEGG_ALLOGRAFT_REJECTION
0.00000 0.00240 0.01642REACTOME_VIRAL_MRNA_TRANSLATION
0.00519 0.00799 0.00142AMIT_SERUM_RESPONSE_40_MCF10A
0.14389 0.00031 0.13847REACTOME_P53_INDEPENDENT_DNA_DAMAGE_RESPONSE
0.00000 0.00196 0.05053REACTOME_REGULATION_OF_GENE_EXPRESSION_IN_BETA_CELLS
0.00000 0.00088 0.06969NCI_CAP_DEPENDENT_TRANSLATION_INITIATION
0.00000 0.00064 0.01385NCI_EUKARYOTIC_TRANSLATION_TERMINATION
0.00000 0.00108 0.00472NCI_PEPTIDE_CHAIN_ELONGATION
0.00000 0.00000 0.01185BUYTAERT_PHOTODYNAMIC_THERAPY_STRESS_UP
0.00843 0.00130 0.01008NCI_FORMATION_OF_THE_TERNARY_COMPLEX__AND_SUBSEQUENTLY__THE_43S_COMPLEX
0.06446 0.00081 0.03879NCI_UBIQUITIN_DEPENDENT_DEGRADATION_OF_CYCLIN_D1
0.00864 0.00140 0.01227REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX
0.02525 0.02059 0.00014BROWNE_HCMV_INFECTION_2HR_UP
0.03419 0.11822 0.15541RODWELL_AGING_KIDNEY_UP
0.00000 0.00009 0.00079SENESE_HDAC1_TARGETS_UP
0.00000 0.00580 0.11047KEGG_RIBOSOME
0.05267 0.01011 0.00702BUDHU_LIVER_CANCER_METASTASIS_UP
0.01825 0.00372 0.13537NCI_RIBOSOMAL_SCANNING_AND_START_CODON_RECOGNITION
0.00000 0.00003 0.00021ONDER_CDH1_TARGETS_1_DN
0.19653 0.00007 0.00044UZONYI_RESPONSE_TO_LEUKOTRIENE_AND_THROMBIN
0.11349 0.00001 0.08966HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN
0.00000 0.00071 0.12231REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT
0.05273 0.00045 0.08611NCI_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1
0.15035 0.00038 0.00631KEGG_PROTEASOME
0.08512 0.00062 0.13298NCI_REGULATION_OF_ACTIVATED_PAK_2P34_BY_PROTEASOME_MEDIATED_DEGRADATION1
0.05297 0.00069 0.09578NCI_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G
0.00000 0.00078 0.01101REACTOME_FORMATION_OF_A_POOL_OF_FREE_40S_SUBUNITS
0.12506 0.09618 0.18796BIOCARTA_IL3_PATHWAY
0.10002 0.00037 0.13163NCI_DEGRADATION_OF_BETA_CATENIN_BY_THE_DESTRUCTION_COMPLEX
0.03663 0.00056 0.06877NCI_REGULATION_OF_ACTIVATED_PAK_2P34_BY_PROTEASOME_MEDIATED_DEGRADATION
0.04176 0.00046 0.11597NCI_UBIQUITIN_MEDIATED_DEGRADATION_OF_PHOSPHORYLATED_CDC25A
0.18505 0.15768 0.03261HEDENFALK_BREAST_CANCER_BRACX_UP