BICLUSTER_ID : UPREG-426
PATHOGENS /4/ : brucella neotomae,aggregatibacter actinomycetemcomitans,bifidobacterium bifidum,lactobacillus acidophilus
TARGETS /4/ : STAT1, IL6, IL1B, TNF
Gene SetLeading Edge Genes
NETPATH IL 4 PATHWAY DOWNSTAT1, GADD45B, DDIT4, CDKN1B, IL6, CXCL2, TNF, MX1
NETPATH IL 6 PATHWAY UPSOCS3, STAT1, GADD45B, ZFP36, MX1, TNF, CDKN1B
NCI IL23PATHWAYSOCS3, IL1B, TNF
BENNETT SYSTEMIC LUPUS ERYTHEMATOSUS
DAUER STAT3 TARGETS DN
LEONARD HYPOXIA
DAUER STAT3 TARGETS UP
LIANG SILENCED BY METHYLATION 2
ZHANG INTERFERON RESPONSE
HORIUCHI WTAP TARGETS DN
KEGG GRAFT VERSUS HOST DISEASE
ICHIBA GRAFT VERSUS HOST DISEASE D7 UP
EINAV INTERFERON SIGNATURE IN CANCER
KEGG ALLOGRAFT REJECTION
SEKI INFLAMMATORY RESPONSE LPS UP
AMIT SERUM RESPONSE 40 MCF10A
RADAEVA RESPONSE TO IFNA1 UP
SIMBULAN UV RESPONSE NORMAL UP
GRAHAM CML QUIESCENT VS CML DIVIDING UP
BOWIE RESPONSE TO TAMOXIFEN
KIM LRRC3B TARGETS
SATO SILENCED BY DEACETYLATION IN PANCREATIC CANCER
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP
ZHU CMV 8 HR UP
BOWIE RESPONSE TO EXTRACELLULAR MATRIX
SANA TNF SIGNALING UP
NETPATH IL 7 PATHWAY UPCXCL2
MOSERLE IFNA RESPONSE
MAHADEVAN RESPONSE TO MP470 DN
UROSEVIC RESPONSE TO IMIQUIMOD
BROWNE INTERFERON RESPONSIVE GENES
TAKEDA TARGETS OF NUP98 HOXA9 FUSION 3D UP
KOBAYASHI EGFR SIGNALING 24HR DN
DER IFN BETA RESPONSE UP
GEISS RESPONSE TO DSRNA UP
HINATA NFKB TARGETS KERATINOCYTE UP
UZONYI RESPONSE TO LEUKOTRIENE AND THROMBIN
SOTIRIOU BREAST CANCER GRADE 1 VS 3 UP
KEGG NOD LIKE RECEPTOR SIGNALING PATHWAY
BASSO CD40 SIGNALING UP
ROSTY CERVICAL CANCER PROLIFERATION CLUSTER
TIAN TNF SIGNALING VIA NFKB
ZUCCHI METASTASIS DN
DIRMEIER LMP1 RESPONSE EARLY
DER IFN GAMMA RESPONSE UP
MAHADEVAN RESPONSE TO MP470 UP
PRAMOONJAGO SOX4 TARGETS UP
FERRARI RESPONSE TO FENRETINIDE UP
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
lactobacillus acidophilusbifidobacterium bifidumbrucella neotomaeaggregatibacter actinomycetemcomitansGeneSet Name
0.00012 0.00103 0.00269 0.02219NETPATH_IL_4_PATHWAY_DOWN
0.00006 0.00007 0.01660 0.10450NETPATH_IL_6_PATHWAY_UP
0.00000 0.00000 0.04130 0.10368NCI_IL23PATHWAY
0.00000 0.00000 0.07917 0.00033BENNETT_SYSTEMIC_LUPUS_ERYTHEMATOSUS
0.00000 0.00000 0.11024 0.00064DAUER_STAT3_TARGETS_DN
0.05078 0.00822 0.16786 0.05026LEONARD_HYPOXIA
0.00259 0.00011 0.00155 0.10550DAUER_STAT3_TARGETS_UP
0.00000 0.00000 0.01035 0.00000LIANG_SILENCED_BY_METHYLATION_2
0.00000 0.00000 0.02415 0.00022ZHANG_INTERFERON_RESPONSE
0.00000 0.00000 0.15769 0.00000HORIUCHI_WTAP_TARGETS_DN
0.00180 0.00101 0.06507 0.02938KEGG_GRAFT_VERSUS_HOST_DISEASE
0.00000 0.00000 0.00537 0.15630ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7_UP
0.00000 0.00000 0.10283 0.00028EINAV_INTERFERON_SIGNATURE_IN_CANCER
0.00026 0.00011 0.14303 0.16184KEGG_ALLOGRAFT_REJECTION
0.00000 0.00000 0.00041 0.00686SEKI_INFLAMMATORY_RESPONSE_LPS_UP
0.00031 0.01845 0.03264 0.17211AMIT_SERUM_RESPONSE_40_MCF10A
0.00000 0.00000 0.14758 0.00108RADAEVA_RESPONSE_TO_IFNA1_UP
0.01522 0.02109 0.01104 0.19842SIMBULAN_UV_RESPONSE_NORMAL_UP
0.00000 0.00000 0.07552 0.03725GRAHAM_CML_QUIESCENT_VS_CML_DIVIDING_UP
0.00010 0.00013 0.04685 0.00978BOWIE_RESPONSE_TO_TAMOXIFEN
0.00009 0.00007 0.14453 0.13510KIM_LRRC3B_TARGETS
0.01124 0.02093 0.03432 0.15298SATO_SILENCED_BY_DEACETYLATION_IN_PANCREATIC_CANCER
0.00000 0.00000 0.00387 0.00646ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP
0.00000 0.00006 0.05292 0.08511ZHU_CMV_8_HR_UP
0.00070 0.00216 0.17499 0.01308BOWIE_RESPONSE_TO_EXTRACELLULAR_MATRIX
0.00000 0.00000 0.00058 0.00899SANA_TNF_SIGNALING_UP
0.06237 0.01764 0.01290 0.17248NETPATH_IL_7_PATHWAY_UP
0.00000 0.00000 0.02846 0.00004MOSERLE_IFNA_RESPONSE
0.00321 0.00016 0.00665 0.04315MAHADEVAN_RESPONSE_TO_MP470_DN
0.00000 0.00005 0.03804 0.09478UROSEVIC_RESPONSE_TO_IMIQUIMOD
0.00000 0.00000 0.00715 0.00002BROWNE_INTERFERON_RESPONSIVE_GENES
0.00000 0.00000 0.02175 0.02929TAKEDA_TARGETS_OF_NUP98_HOXA9_FUSION_3D_UP
0.00000 0.00000 0.06164 0.00000KOBAYASHI_EGFR_SIGNALING_24HR_DN
0.00144 0.02261 0.05335 0.09967DER_IFN_BETA_RESPONSE_UP
0.00027 0.00426 0.01183 0.05975GEISS_RESPONSE_TO_DSRNA_UP
0.00000 0.00013 0.09086 0.19710HINATA_NFKB_TARGETS_KERATINOCYTE_UP
0.03748 0.08234 0.00256 0.07257UZONYI_RESPONSE_TO_LEUKOTRIENE_AND_THROMBIN
0.00000 0.00000 0.00237 0.00000SOTIRIOU_BREAST_CANCER_GRADE_1_VS_3_UP
0.00000 0.00000 0.00378 0.09792KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY
0.00000 0.00006 0.03927 0.17860BASSO_CD40_SIGNALING_UP
0.00000 0.00000 0.02738 0.00000ROSTY_CERVICAL_CANCER_PROLIFERATION_CLUSTER
0.00000 0.00000 0.05899 0.00984TIAN_TNF_SIGNALING_VIA_NFKB
0.04132 0.03751 0.01371 0.15521ZUCCHI_METASTASIS_DN
0.00007 0.00294 0.00214 0.09188DIRMEIER_LMP1_RESPONSE_EARLY
0.00091 0.00551 0.08485 0.03944DER_IFN_GAMMA_RESPONSE_UP
0.00272 0.00318 0.09849 0.00035MAHADEVAN_RESPONSE_TO_MP470_UP
0.00031 0.00000 0.10655 0.01841PRAMOONJAGO_SOX4_TARGETS_UP
0.15133 0.05329 0.02413 0.00649FERRARI_RESPONSE_TO_FENRETINIDE_UP