BICLUSTER_ID : UPREG-68
PATHOGENS /5/ : bacillus anthracis,lactobacillus acidophilus,yersinia enterocolitica,helicobacter pylori,ehrlichia chaffeensis
TARGETS /3/ : IL6, CCL5, CCL2
Gene SetLeading Edge Genes
NETPATH IL 4 PATHWAY DOWNIL6, GADD45B, CCL2, CXCL2, IRF1
NETPATH IL 1 PATHWAY UPCCL7, IL6, CXCL1, CCL2, CXCL2
NETPATH IL 7 PATHWAY UPCXCL1, CCL5, CXCL2
NETPATH IL 5 PATHWAY UPPLSCR1, REL, CCL2, CASP4
NCI IL23PATHWAYIL6, CXCL1
NETPATH IL 2 PATHWAY UPKLF6, IL6, IRF1, GADD45G
KEGG CYTOKINE CYTOKINE RECEPTOR INTERACTION
NOJIMA SFRP2 TARGETS UP
MISSIAGLIA REGULATED BY METHYLATION UP
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL UP
GRAHAM NORMAL QUIESCENT VS NORMAL DIVIDING UP
LEONARD HYPOXIA
BIOCARTA NFKB PATHWAY
MAHAJAN RESPONSE TO IL1A UP
AUJLA IL22 AND IL17A SIGNALING
ICHIBA GRAFT VERSUS HOST DISEASE D7 UP
REACTOME PEPTIDE LIGAND BINDING RECEPTORS
CROONQUIST STROMAL STIMULATION UP
LINDSTEDT DENDRITIC CELL MATURATION B
BIOCARTA IL1R PATHWAY
SA MMP CYTOKINE CONNECTION
RASHI RESPONSE TO IONIZING RADIATION 2
LINDSTEDT DENDRITIC CELL MATURATION A
DACOSTA ERCC3 ALLELE XPCS VS TTD UP
AMIT EGF RESPONSE 40 HELA
MAHADEVAN RESPONSE TO MP470 DN
THEILGAARD NEUTROPHIL AT SKIN WOUND UP
HARRIS HYPOXIA
BIOCARTA LAIR PATHWAY
HINATA NFKB TARGETS KERATINOCYTE UP
KEGG NOD LIKE RECEPTOR SIGNALING PATHWAY
BASSO CD40 SIGNALING UP
MARZEC IL2 SIGNALING UP
NAGASHIMA NRG1 SIGNALING UP
SOUCEK MYC TARGETS
BIOCARTA LYM PATHWAY
DUTTA APOPTOSIS VIA NFKB
DIRMEIER LMP1 RESPONSE EARLY
MAHADEVAN RESPONSE TO MP470 UP
FERRARI RESPONSE TO FENRETINIDE UP
REACTOME CHEMOKINE RECEPTORS BIND CHEMOKINES
BILD HRAS ONCOGENIC SIGNATURE
ZHOU INFLAMMATORY RESPONSE LIVE UP
ONDER CDH1 TARGETS 3 DN
AMIT EGF RESPONSE 120 HELA
DAUER STAT3 TARGETS UP
NETPATH IL 3 PATHWAY UP
KEGG LEISHMANIA INFECTION
WINTER HYPOXIA METAGENE
MCLACHLAN DENTAL CARIES UP
CORUM TNF-ALPHA/NF-KAPPA B SIGNALING COMPLEX CHUK KPNA3 NFKB2 NFKBIB REL IKBKG NFKB1 NFKBIE RELB NFKBIA RELA TNIP2
DAZARD UV RESPONSE CLUSTER G2
TAVOR CEBPA TARGETS UP
FOSTER INFLAMMATORY RESPONSE LPS DN
MCLACHLAN DENTAL CARIES DN
SEKI INFLAMMATORY RESPONSE LPS UP
AMIT SERUM RESPONSE 40 MCF10A
GAURNIER PSMD4 TARGETS
GRAHAM CML QUIESCENT VS CML DIVIDING UP
ZHANG RESPONSE TO IKK INHIBITOR AND TNF UP
ZHU CMV 8 HR UP
NCI AMB2 NEUTROPHILS PATHWAY
ZHOU INFLAMMATORY RESPONSE LPS UP
SMID BREAST CANCER LUMINAL B DN
BIOCARTA INFLAM PATHWAY
SANA TNF SIGNALING UP
FOSTER INFLAMMATORY RESPONSE LPS UP
BROWNE HCMV INFECTION 2HR UP
ONDER CDH1 TARGETS 2 DN
CORUM REL-MAP3K8-RELA-TNIP2-PAPOLA COMPLEX
LIU TARGETS OF VMYB VS CMYB DN
HAHTOLA MYCOSIS FUNGOIDES CD4 UP
SESTO RESPONSE TO UV C3
VERHAAK AML WITH NPM1 MUTATED UP
BROCKE APOPTOSIS REVERSED BY IL6
GEISS RESPONSE TO DSRNA UP
KEGG CYTOSOLIC DNA SENSING PATHWAY
UZONYI RESPONSE TO LEUKOTRIENE AND THROMBIN
GERY CEBP TARGETSGADD45B, CXCL1, JUNB, GADD45G
BIOCARTA GRANULOCYTES PATHWAY
NCI IL12 2PATHWAY
ZHOU INFLAMMATORY RESPONSE FIMA UP
HESS TARGETS OF HOXA9 AND MEIS1 DN
TIAN TNF SIGNALING VIA NFKB
ZHU CMV ALL UP
KEGG TOLL LIKE RECEPTOR SIGNALING PATHWAY
GRAHAM CML QUIESCENT VS NORMAL DIVIDING UP
OSWALD HEMATOPOIETIC STEM CELL IN COLLAGEN GEL DN
LEE LIVER CANCER HEPATOBLAST
ZUCCHI METASTASIS DN
NAGASHIMA EGF SIGNALING UP
PRAMOONJAGO SOX4 TARGETS UP
HINATA NFKB TARGETS FIBROBLAST UP
AMIT EGF RESPONSE 60 MCF10A
Color legend
q-value10.20.050.010.0010.0001
Color
TABLE OF Q-VALUES
yersinia enterocolitica wap bl6helicobacter pylori kx1 mgepyersinia enterocolitica p60 bclactobacillus acidophilusehrlichia chaffeensis arkansaehrlichia chaffeensis wakullabacillus anthracishelicobacter pylori kx2 mgepGeneSet Name
0.00145 0.00002 0.00040 0.00012 0.00001 0.00000 0.12825 0.00009NETPATH_IL_4_PATHWAY_DOWN
0.00024 0.00000 0.00001 0.00114 0.00744 0.00022 0.00738 0.00000NETPATH_IL_1_PATHWAY_UP
0.00623 0.00294 0.00028 0.06237 0.00034 0.00004 0.04896 0.00019NETPATH_IL_7_PATHWAY_UP
0.02712 0.00021 0.00159 0.01533 0.00007 0.00000 0.00652 0.00002NETPATH_IL_5_PATHWAY_UP
0.00000 0.00589 0.00000 0.00000 0.00000 0.00020 0.00010 0.01454NCI_IL23PATHWAY
0.01769 0.02575 0.00018 0.01173 0.00029 0.00006 0.18345 0.04909NETPATH_IL_2_PATHWAY_UP
0.00000 0.02218 0.00000 0.00000 0.00000 0.00000 0.00020 0.00022KEGG_CYTOKINE_CYTOKINE_RECEPTOR_INTERACTION
0.00172 0.00032 0.00304 0.00685 0.01772 0.00340 0.00004 0.00000NOJIMA_SFRP2_TARGETS_UP
0.00468 0.00725 0.00145 0.00001 0.00123 0.00006 0.06111 0.00396MISSIAGLIA_REGULATED_BY_METHYLATION_UP
0.00000 0.00008 0.00000 0.00598 0.00488 0.00301 0.01784 0.00000OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_UP
0.00000 0.03509 0.00000 0.00008 0.00021 0.00547 0.15911 0.00541GRAHAM_NORMAL_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.08551 0.00002 0.02593 0.05078 0.01232 0.00008 0.03520 0.00000LEONARD_HYPOXIA
0.11451 0.00155 0.03120 0.01221 0.06659 0.00699 0.09838 0.00304BIOCARTA_NFKB_PATHWAY
0.00113 0.00517 0.00009 0.00430 0.01198 0.00447 0.01475 0.00001MAHAJAN_RESPONSE_TO_IL1A_UP
0.01525 0.01124 0.00824 0.00386 0.00697 0.01045 0.19473 0.01624AUJLA_IL22_AND_IL17A_SIGNALING
0.00000 0.02414 0.00000 0.00000 0.00000 0.00000 0.00986 0.07361ICHIBA_GRAFT_VERSUS_HOST_DISEASE_D7_UP
0.00006 0.09639 0.00005 0.01634 0.00094 0.00014 0.14368 0.06781REACTOME_PEPTIDE_LIGAND_BINDING_RECEPTORS
0.04761 0.03674 0.01017 0.04711 0.00000 0.00000 0.03531 0.05041CROONQUIST_STROMAL_STIMULATION_UP
0.04571 0.00000 0.00237 0.00000 0.00007 0.00000 0.00000 0.00000LINDSTEDT_DENDRITIC_CELL_MATURATION_B
0.00017 0.00078 0.00008 0.02532 0.17481 0.01394 0.00016 0.00292BIOCARTA_IL1R_PATHWAY
0.00406 0.01005 0.00023 0.11732 0.00037 0.00000 0.15130 0.11687SA_MMP_CYTOKINE_CONNECTION
0.00427 0.00000 0.00008 0.00034 0.00307 0.00001 0.00554 0.00000RASHI_RESPONSE_TO_IONIZING_RADIATION_2
0.00011 0.00015 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000LINDSTEDT_DENDRITIC_CELL_MATURATION_A
0.09591 0.11957 0.19778 0.10069 0.11533 0.06560 0.06390 0.19781DACOSTA_ERCC3_ALLELE_XPCS_VS_TTD_UP
0.01474 0.00125 0.00031 0.00081 0.03874 0.00042 0.00021 0.00053AMIT_EGF_RESPONSE_40_HELA
0.00031 0.00340 0.00009 0.00321 0.18500 0.08720 0.19442 0.00005MAHADEVAN_RESPONSE_TO_MP470_DN
0.00024 0.00000 0.00000 0.09352 0.01384 0.00174 0.00240 0.00010THEILGAARD_NEUTROPHIL_AT_SKIN_WOUND_UP
0.00250 0.00027 0.00029 0.18721 0.00160 0.00025 0.07884 0.00009HARRIS_HYPOXIA
0.00578 0.00718 0.00240 0.00383 0.00046 0.00063 0.00839 0.00141BIOCARTA_LAIR_PATHWAY
0.00000 0.00002 0.00000 0.00000 0.00055 0.00001 0.00000 0.00000HINATA_NFKB_TARGETS_KERATINOCYTE_UP
0.00045 0.00005 0.00008 0.00000 0.00013 0.00000 0.00215 0.00019KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY
0.00000 0.00077 0.00003 0.00000 0.00000 0.00000 0.00000 0.01278BASSO_CD40_SIGNALING_UP
0.00016 0.04862 0.00008 0.15147 0.00161 0.00004 0.05995 0.01784MARZEC_IL2_SIGNALING_UP
0.00002 0.00000 0.00000 0.02256 0.00648 0.00000 0.00590 0.00000NAGASHIMA_NRG1_SIGNALING_UP
0.00000 0.00011 0.00008 0.00010 0.00003 0.00027 0.00345 0.00002SOUCEK_MYC_TARGETS
0.11092 0.02445 0.04751 0.09025 0.00036 0.00068 0.02586 0.06917BIOCARTA_LYM_PATHWAY
0.00646 0.00000 0.00013 0.00233 0.00000 0.00000 0.01600 0.00000DUTTA_APOPTOSIS_VIA_NFKB
0.00000 0.00157 0.00000 0.00007 0.00000 0.00000 0.00000 0.00124DIRMEIER_LMP1_RESPONSE_EARLY
0.00025 0.00002 0.00000 0.00272 0.00029 0.00001 0.00593 0.00001MAHADEVAN_RESPONSE_TO_MP470_UP
0.00508 0.00008 0.00050 0.15133 0.00947 0.00156 0.01068 0.00002FERRARI_RESPONSE_TO_FENRETINIDE_UP
0.00002 0.00018 0.00000 0.00017 0.00000 0.00000 0.00253 0.00000REACTOME_CHEMOKINE_RECEPTORS_BIND_CHEMOKINES
0.00208 0.00029 0.00000 0.00628 0.00696 0.00024 0.13675 0.00132BILD_HRAS_ONCOGENIC_SIGNATURE
0.00000 0.00000 0.00000 0.00000 0.01092 0.00039 0.00000 0.00000ZHOU_INFLAMMATORY_RESPONSE_LIVE_UP
0.00150 0.00085 0.00099 0.00174 0.02809 0.00507 0.00403 0.00020ONDER_CDH1_TARGETS_3_DN
0.00077 0.00003 0.00004 0.09453 0.07404 0.00037 0.08697 0.00007AMIT_EGF_RESPONSE_120_HELA
0.05660 0.00067 0.02597 0.00259 0.01097 0.00307 0.00062 0.00008DAUER_STAT3_TARGETS_UP
0.00000 0.03326 0.00000 0.00372 0.00000 0.00000 0.19023 0.13629NETPATH_IL_3_PATHWAY_UP
0.00675 0.00031 0.01693 0.00174 0.00000 0.00000 0.01847 0.01576KEGG_LEISHMANIA_INFECTION
0.06926 0.00017 0.00442 0.11168 0.11984 0.01067 0.14321 0.00315WINTER_HYPOXIA_METAGENE
0.00049 0.00018 0.00008 0.00667 0.00000 0.00000 0.11704 0.00006MCLACHLAN_DENTAL_CARIES_UP
0.09646 0.00204 0.02325 0.00206 0.13511 0.03294 0.01201 0.00012CORUM_TNF-ALPHA/NF-KAPPA_B_SIGNALING_COMPLEX_CHUK_KPNA3_NFKB2_NFKBIB_REL_IKBKG__NFKB1_NFKBIE_RELB__NFKBIA_RELA_TNIP2
0.11521 0.00079 0.01385 0.06213 0.03944 0.00111 0.15429 0.00000DAZARD_UV_RESPONSE_CLUSTER_G2
0.15470 0.03788 0.02930 0.10298 0.00572 0.00085 0.17277 0.04908TAVOR_CEBPA_TARGETS_UP
0.00000 0.00006 0.00000 0.00000 0.00000 0.00000 0.09653 0.00146FOSTER_INFLAMMATORY_RESPONSE_LPS_DN
0.00078 0.00030 0.00014 0.01242 0.00000 0.00000 0.12968 0.00040MCLACHLAN_DENTAL_CARIES_DN
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000SEKI_INFLAMMATORY_RESPONSE_LPS_UP
0.00000 0.00874 0.00004 0.00031 0.00705 0.00005 0.00325 0.00219AMIT_SERUM_RESPONSE_40_MCF10A
0.00000 0.00002 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000GAURNIER_PSMD4_TARGETS
0.00810 0.00937 0.00030 0.00000 0.00007 0.00003 0.00009 0.00677GRAHAM_CML_QUIESCENT_VS_CML_DIVIDING_UP
0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000 0.00000ZHANG_RESPONSE_TO_IKK_INHIBITOR_AND_TNF_UP
0.00025 0.01261 0.00000 0.00000 0.00000 0.00000 0.07377 0.11599ZHU_CMV_8_HR_UP
0.03531 0.08278 0.00186 0.18674 0.00021 0.00002 0.18280 0.08235NCI_AMB2_NEUTROPHILS_PATHWAY
0.00000 0.00307 0.00000 0.00000 0.00269 0.00012 0.00000 0.00059ZHOU_INFLAMMATORY_RESPONSE_LPS_UP
0.00087 0.17326 0.00148 0.07352 0.00000 0.00000 0.02727 0.18998SMID_BREAST_CANCER_LUMINAL_B_DN
0.00000 0.05381 0.00004 0.00000 0.03146 0.00595 0.00049 0.02042BIOCARTA_INFLAM_PATHWAY
0.00017 0.00000 0.00000 0.00000 0.00000 0.00000 0.00096 0.00000SANA_TNF_SIGNALING_UP
0.00000 0.00587 0.00000 0.00000 0.00000 0.00000 0.19461 0.00313FOSTER_INFLAMMATORY_RESPONSE_LPS_UP
0.06014 0.00034 0.00673 0.06476 0.15614 0.11885 0.00022 0.00890BROWNE_HCMV_INFECTION_2HR_UP
0.00065 0.03557 0.00011 0.02211 0.00757 0.00036 0.14327 0.01031ONDER_CDH1_TARGETS_2_DN
0.05454 0.12111 0.06284 0.05982 0.10047 0.16009 0.18566 0.11696CORUM_REL-MAP3K8-RELA-TNIP2-PAPOLA_COMPLEX
0.16617 0.00459 0.08106 0.05963 0.03006 0.00731 0.12992 0.02010LIU_TARGETS_OF_VMYB_VS_CMYB_DN
0.00080 0.00215 0.00006 0.11701 0.00262 0.00004 0.00029 0.00008HAHTOLA_MYCOSIS_FUNGOIDES_CD4_UP
0.00757 0.00438 0.00270 0.02540 0.17152 0.01412 0.00327 0.00018SESTO_RESPONSE_TO_UV_C3
0.00001 0.00063 0.00000 0.03043 0.00000 0.00000 0.00551 0.00145VERHAAK_AML_WITH_NPM1_MUTATED_UP
0.01123 0.01130 0.00068 0.03083 0.00000 0.00000 0.17260 0.00158BROCKE_APOPTOSIS_REVERSED_BY_IL6
0.00179 0.00000 0.00000 0.00027 0.00175 0.00022 0.03512 0.00000GEISS_RESPONSE_TO_DSRNA_UP
0.00145 0.03185 0.00805 0.00033 0.01044 0.00252 0.02609 0.01719KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY
0.00000 0.00000 0.00000 0.03748 0.02814 0.00336 0.00003 0.00000UZONYI_RESPONSE_TO_LEUKOTRIENE_AND_THROMBIN
0.00277 0.00133 0.00510 0.00427 0.01308 0.00116 0.01488 0.00038GERY_CEBP_TARGETS
0.03005 0.01647 0.00695 0.01385 0.00024 0.00012 0.03044 0.12825BIOCARTA_GRANULOCYTES_PATHWAY
0.00709 0.05996 0.00140 0.00000 0.00000 0.00000 0.00781 0.10946NCI_IL12_2PATHWAY
0.00018 0.00157 0.00000 0.00018 0.09979 0.02576 0.00000 0.00011ZHOU_INFLAMMATORY_RESPONSE_FIMA_UP
0.00000 0.04632 0.00004 0.04650 0.00000 0.00000 0.13442 0.11528HESS_TARGETS_OF_HOXA9_AND_MEIS1_DN
0.00000 0.00000 0.00000 0.00000 0.00003 0.00000 0.00000 0.00000TIAN_TNF_SIGNALING_VIA_NFKB
0.02045 0.01293 0.00004 0.00466 0.00053 0.00083 0.14821 0.01057ZHU_CMV_ALL_UP
0.00027 0.01726 0.00219 0.00000 0.00000 0.00000 0.15813 0.01658KEGG_TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY
0.00024 0.00000 0.00000 0.00000 0.00001 0.00009 0.00000 0.00000GRAHAM_CML_QUIESCENT_VS_NORMAL_DIVIDING_UP
0.00000 0.00010 0.00000 0.00475 0.00511 0.00265 0.01781 0.00000OSWALD_HEMATOPOIETIC_STEM_CELL_IN_COLLAGEN_GEL_DN
0.00139 0.07700 0.00168 0.04137 0.00021 0.00011 0.00308 0.10358LEE_LIVER_CANCER_HEPATOBLAST
0.08451 0.00723 0.05022 0.04132 0.10538 0.00899 0.00000 0.00076ZUCCHI_METASTASIS_DN
0.00000 0.00000 0.00000 0.05878 0.00040 0.00000 0.00009 0.00000NAGASHIMA_EGF_SIGNALING_UP
0.02502 0.00000 0.00119 0.00031 0.07569 0.00099 0.08362 0.00000PRAMOONJAGO_SOX4_TARGETS_UP
0.03435 0.00000 0.00008 0.01167 0.00358 0.00151 0.00000 0.00009HINATA_NFKB_TARGETS_FIBROBLAST_UP
0.00000 0.00002 0.00000 0.00978 0.02646 0.00070 0.00559 0.00000AMIT_EGF_RESPONSE_60_MCF10A