Biopsy specimens from patients with ulcerative colitis (UC) and Crohn 's disease (CD) , from both affected and unaffected areas , and also from a group of colonic biopsies from healthy controls , were included in our study.
Therefore , ileal and colonic mucosal biopsies from nonaffected regions of patients with ulcerative colitis (UC) and Crohn 's disease (CD) , as well as non-IBD probands , were subjected to Affymetrix DNA-microarray analysis.
We examined the expression of the transcription factor NF-kappa B , a nuclear trans-acting factor known to play a key role in cytokine gene regulation , in patients with inflammatory bowel disease (IBD).
The combination of IFN-gamma and IL-2 has been demonstrated to induce or promote transcription from selected inflammatory cytokine genes in both monocytes and macrophages.
These findings suggest that rapid methylation of the evolutionarily conserved -53 CpG by Dnmt3a may suppress IFN-gamma transcription in developing TH2 cells by directly inhibiting transcription factor binding.