After the identification of the human interferon-gamma (IFNG) variant G54D (c. 287G) A , ss105106770) in DNA samples from Ghana , West Africa , systematic mutation screening of IFNG by the LightCycler ((R)) - based procedure of high-resolution melting (HRM) revealed additional rare mutations.
Electrophoretic mobility shift assay was used to investigate whether these variants have altered DNA-binding abilities , since intronic enhancer elements have been reported for the IFNG gene.
The study concludes that such genetic background for a proposed non-specific enhancer element with (CA) n repeat within intron 1 of the IFNG gene might put the individuals with this genotype at higher risk to promote the development of sporadic breast cancer due to a resultant compromised immune surveillance.
Therefore , allele-specific gene expression due to LOH of the CA repeat could be assumed to be an important event in invasive breast cancer development.
Previous studies have shown loss of heterozygosity (LOH) at the BRCA1 and FHIT genes in sporadic primary breast cancer.