Biorithm  1.1
FunctionalEnrichmentAlgorithm Member List
This is the complete list of members for FunctionalEnrichmentAlgorithm, including all inherited members.
_annotationsFunctionalEnrichmentAlgorithm [protected]
_categoryFunctionalEnrichmentAlgorithm [protected]
_clusterGenesFunctionalEnrichmentAlgorithm [protected]
_goFunctionalEnrichmentAlgorithm [protected]
_logHelperFunctionalEnrichmentAlgorithm [protected, static]
_universeGenesFunctionalEnrichmentAlgorithm [protected]
computeEnrichedFunctions(const set< string > &functionsToProcess)FunctionalEnrichmentAlgorithm [virtual]
computeEnrichmentForFunction(const string funcType, const string funcId)=0FunctionalEnrichmentAlgorithm [pure virtual]
FunctionalEnrichmentAlgorithm(const set< MyNodeId > &clusterGenes, const set< MyNodeId > &universeGenes, MyAnnotations &annotations, const GeneOntology &go, string category)FunctionalEnrichmentAlgorithm
FunctionalEnrichmentAlgorithm(MyAnnotations &annotations, const GeneOntology &go, string category)FunctionalEnrichmentAlgorithm [inline]
printEnrichmentResults(ostream &ostr)=0FunctionalEnrichmentAlgorithm [pure virtual]
~FunctionalEnrichmentAlgorithm()FunctionalEnrichmentAlgorithm [inline, virtual]
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