Biorithm  1.1
HeatKernel Member List
This is the complete list of members for HeatKernel, including all inherited members.
_checkFinished(unsigned int iters, double maxDiff)HeatKernel [protected, virtual]
_computeEnergy()AbstractSingleReconciliation [inline, protected, virtual]
_currGraphAAbstractSingleReconciliation [protected]
_currNodeWeightsAAbstractSingleReconciliation [protected]
_currSampleAAbstractSingleReconciliation [protected]
_EPSILONAbstractSingleReconciliation [protected]
_graphsAbstractSingleReconciliation [protected]
_initialiseNodeWeights(map< MyNodeId, double > &initial, map< MyNodeId, double > &current, map< MyNodeId, double > &previous, MyGraph &graph, const MyPointSet &weights, unsigned int sample, bool normalize=true)AbstractSingleReconciliation [protected, virtual]
_initialiseNodeWeights(map< MyNodeId, double > &initial, map< MyNodeId, double > &current, map< MyNodeId, double > &previous, MyGraph &graph)AbstractSingleReconciliation [protected, virtual]
_initialiseNodeWeights(map< MyNodeId, double > &initial, map< MyNodeId, double > &current, map< MyNodeId, double > &previous, MyGraph &graph, double val)AbstractSingleReconciliation [protected, virtual]
_initialNodeWeightsAAbstractSingleReconciliation [protected]
_MAX_ITERSAbstractSingleReconciliation [protected]
_outputPrefixAbstractSingleReconciliation [protected]
_prevNodeWeightsAAbstractSingleReconciliation [protected]
_printNodeWeights(ofstream &ostr)AbstractSingleReconciliation [protected, virtual]
_qAbstractSingleReconciliation [protected]
_runAlgorithmOnceA()AbstractSingleReconciliation [protected, virtual]
_runForGraphs()AbstractSingleReconciliation [protected, virtual]
_runForWeights()AbstractSingleReconciliation [protected, virtual]
_tHeatKernel [protected]
_updateNodeWeightA(MyNode node)HeatKernel [protected, virtual]
_weightsAbstractSingleReconciliation [protected]
AbstractSingleReconciliation(MyGraph &graph, MyPointSet &weights, double q, double maxIters, double epsilon, string outputPrefix)AbstractSingleReconciliation [inline]
AbstractSingleReconciliation(vector< MyGraph > &graphs, double q, double maxIters, double epsilon, string outputPrefix)AbstractSingleReconciliation [inline]
getName()HeatKernel [inline, virtual]
HeatKernel(MyGraph &graph, MyPointSet &weights, double q, double maxIters, string outputPrefix)HeatKernel [inline]
HeatKernel(vector< MyGraph > &graphs, double q, double maxIters, string outputPrefix)HeatKernel [inline]
run()AbstractSingleReconciliation [virtual]
setCurrGraphA(MyGraph &g)AbstractSingleReconciliation [inline]
setCurrSampleA(unsigned int n)AbstractSingleReconciliation [inline]
~AbstractSingleReconciliation()AbstractSingleReconciliation [inline, virtual]
~HeatKernel()HeatKernel [inline, virtual]
 All Classes Functions Variables Typedefs Friends