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Biorithm
1.1
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| _commandLine (defined in MyGenericParams) | MyGenericParams | [protected] |
| _constructOutputFilePrefix() (defined in MyEvalGainParams) | MyEvalGainParams | [inline, protected, virtual] |
| _createOutputStreamsMap() (defined in MyEvalGainParams) | MyEvalGainParams | [protected, virtual] |
| _ignoredEvidenceCodes (defined in MyEvalGainParams) | MyEvalGainParams | [protected] |
| _options (defined in MyGenericParams) | MyGenericParams | [protected] |
| _outputFilePrefix (defined in MyGenericParams) | MyGenericParams | [protected] |
| _outputStreams (defined in MyGenericParams) | MyGenericParams | [protected] |
| checkParameters() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline, virtual] |
| comparePredictionsStream (defined in MyEvalGainParams) | MyEvalGainParams | |
| evaluationPlotsDir (defined in MyEvalGainParams) | MyEvalGainParams | |
| evaluationROCStream (defined in MyEvalGainParams) | MyEvalGainParams | |
| evaluationStream (defined in MyEvalGainParams) | MyEvalGainParams | |
| evaluationSummaryStream (defined in MyEvalGainParams) | MyEvalGainParams | |
| getAnnotationsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getComparePredictions() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getConvertFunction() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getGOFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getOnlyFunctionsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getPredictionsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| getValidationAnnotationsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
| logStream (defined in MyGenericParams) | MyGenericParams | |
| openOutputFiles() (defined in MyGenericParams) | MyGenericParams | |
| setParameters(unsigned int argc, char **argv) (defined in MyEvalGainParams) | MyEvalGainParams | [virtual] |
1.7.6.1