Biorithm
1.1
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_commandLine (defined in MyGenericParams) | MyGenericParams | [protected] |
_constructOutputFilePrefix() (defined in MyEvalGainParams) | MyEvalGainParams | [inline, protected, virtual] |
_createOutputStreamsMap() (defined in MyEvalGainParams) | MyEvalGainParams | [protected, virtual] |
_ignoredEvidenceCodes (defined in MyEvalGainParams) | MyEvalGainParams | [protected] |
_options (defined in MyGenericParams) | MyGenericParams | [protected] |
_outputFilePrefix (defined in MyGenericParams) | MyGenericParams | [protected] |
_outputStreams (defined in MyGenericParams) | MyGenericParams | [protected] |
checkParameters() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline, virtual] |
comparePredictionsStream (defined in MyEvalGainParams) | MyEvalGainParams | |
evaluationPlotsDir (defined in MyEvalGainParams) | MyEvalGainParams | |
evaluationROCStream (defined in MyEvalGainParams) | MyEvalGainParams | |
evaluationStream (defined in MyEvalGainParams) | MyEvalGainParams | |
evaluationSummaryStream (defined in MyEvalGainParams) | MyEvalGainParams | |
getAnnotationsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getComparePredictions() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getConvertFunction() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getGOFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getOnlyFunctionsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getPredictionsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
getValidationAnnotationsFile() const (defined in MyEvalGainParams) | MyEvalGainParams | [inline] |
logStream (defined in MyGenericParams) | MyGenericParams | |
openOutputFiles() (defined in MyGenericParams) | MyGenericParams | |
setParameters(unsigned int argc, char **argv) (defined in MyEvalGainParams) | MyEvalGainParams | [virtual] |