This is the complete list of members for
SetCoverEnrichment, including all inherited members.
_annotations | FunctionalEnrichmentAlgorithm | [protected] |
_category | FunctionalEnrichmentAlgorithm | [protected] |
_clusterGenes | FunctionalEnrichmentAlgorithm | [protected] |
_go | FunctionalEnrichmentAlgorithm | [protected] |
_logHelper | FunctionalEnrichmentAlgorithm | [protected, static] |
_universeGenes | FunctionalEnrichmentAlgorithm | [protected] |
computeEnrichedFunctions(const set< string > &functionsToProcess) | SetCoverEnrichment | [virtual] |
computeEnrichmentForFunction(const string funcType, const string funcId) | SetCoverEnrichment | [inline, virtual] |
FunctionalEnrichmentAlgorithm(const set< MyNodeId > &clusterGenes, const set< MyNodeId > &universeGenes, MyAnnotations &annotations, const GeneOntology &go, string category) | FunctionalEnrichmentAlgorithm | |
FunctionalEnrichmentAlgorithm(MyAnnotations &annotations, const GeneOntology &go, string category) | FunctionalEnrichmentAlgorithm | [inline] |
printEnrichmentResults(ostream &ostr) | SetCoverEnrichment | [virtual] |
SetCoverEnrichment(const MyGraph &clusterGraph, const MyGraph &universeGraph, MyAnnotations &annotations, const GeneOntology &go, string category) | SetCoverEnrichment | |
~FunctionalEnrichmentAlgorithm() | FunctionalEnrichmentAlgorithm | [inline, virtual] |
~SetCoverEnrichment() | SetCoverEnrichment | [inline, virtual] |