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Biorithm
1.1
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Biorithm
1.1
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Public Types | |
| enum | RuleType { ISLET_RULE = 1, TWIG_RULE = 2, SERIES_RULE = 4, TRIANGLE_RULE = 8, SIMPLICIAL_RULE = 16, ALMOST_SIMPLICIAL_RULE = 32, ALL_RULES_MASK = 0xffff } |
Public Member Functions | |
| Treewidth (string graphFile) | |
| Treewidth (Graph graphIn) | |
| void | getGraph (Graph &g) const |
| Graph | getGraphCopy () |
| vector< NodeId > | getNodes () |
| int | getDegree (NodeId nodeId) |
| int | getLow () |
| int | numNodes () |
| int | numEdges () |
| void | printEdges (ostream &ostr) |
| void | runRule (RuleType rule) |
| void | connectNeighbors (NodeId nodeId) |
| void | pushNeighbors (stack< NodeId > &s, NodeId nodeId) |
| void | updateLow (int degree) |
| bool | isSimplicial (NodeId nodeId) |
| bool | isAlmostSimplicial (NodeId nodeId) |
| vector< NodeId > | getNeighbors (NodeId nodeId) |
| void | core (unsigned int k) |
| vector< NodeId > | getClique (NodeId nodeId) |
| void | reduce () |
| int | lowerBound () |
1.7.6.1
