Biorithm
1.1
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This class takes an input stream of a matrix data file and analyzes the the independence of the columns It uses the lattice class to only count the "all positive" bitpatterns. More...
#include <DualMiner.h>
Public Member Functions | |
DualMiner (float balance=0.5, float support=1.0, unsigned int buffer_size=1000, bool positive=false, BinaryMatrix *tm=NULL, int mode=MODE_DUAL_NULL) | |
DualMiner (const DualMiner &src) | |
virtual | ~DualMiner () |
virtual DualMiner & | operator= (const DualMiner &rhs) |
Protected Member Functions | |
virtual void | analyzeHelper () |
virtual void | analyzeLevels (unsigned int bot, unsigned int top, const PatternBounder *pb) |
virtual unsigned int | analyzeLevel (unsigned int level) |
virtual void | handlePrinting (unsigned int level) |
virtual double | scoreLevel (unsigned int level, unsigned int bot, unsigned int top, const PatternBounder *pb) const |
Protected Attributes | |
BSEvaluator * | bse |
int | mode |
This class takes an input stream of a matrix data file and analyzes the the independence of the columns It uses the lattice class to only count the "all positive" bitpatterns.
DualMiner::DualMiner | ( | float | balance = 0.5 , |
float | support = 1.0 , |
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unsigned int | buffer_size = 1000 , |
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bool | positive = false , |
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BinaryMatrix * | bm = NULL , |
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int | mode = MODE_DUAL_NULL |
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) |
The Miner that uses the lattice data structure this lets it only count the positive itemsets
------------------------------- Parameters ------------------------------- float balance The minimum fraction of rows that must comprise a bitpattern float support The fraction of bitpatterns that have to succeed at each level unsigned int buffer_size the amount of combinations allowed to sit in the queue at once
DualMiner::DualMiner | ( | const DualMiner & | src | ) |
DualMiner::~DualMiner | ( | ) | [virtual] |
Destructor
void DualMiner::analyzeHelper | ( | ) | [protected, virtual] |
Analyzes the matrix, one level at a time
--------------------------------- Return --------------------------------- An error message
Implements Miner.
unsigned int DualMiner::analyzeLevel | ( | unsigned int | level | ) | [protected, virtual] |
Analyzes a single level
------------------------------- Parameters ------------------------------- unsigned int level The current level
--------------------------------- Return --------------------------------- Whether or not we should continue (whether or not any matches were found)
void DualMiner::analyzeLevels | ( | unsigned int | bot, |
unsigned int | top, | ||
const PatternBounder * | pb | ||
) | [protected, virtual] |
Analyzes a set of levels
------------------------------- Parameters ------------------------------- unsigned int bot The bottom level unsigned int top The top level const PatternBounder* pb The pattern bounder
--------------------------------- Return --------------------------------- Whether or not we should continue (whether or not any matches were found)
void DualMiner::handlePrinting | ( | unsigned int | prevlevel | ) | [protected, virtual] |
Handle printing
------------------------------- Parameters ------------------------------- unsigned int prevlevel The previous level
double DualMiner::scoreLevel | ( | unsigned int | level, |
unsigned int | bot, | ||
unsigned int | top, | ||
const PatternBounder * | pb | ||
) | const [protected, virtual] |
Assigns a score to a level
------------------------------- Parameters ------------------------------- unsigned int level The current level
--------------------------------- Return --------------------------------- Whether or not we should continue (whether or not any matches were found)