Files |
file | biofunction.h [code] |
| Define the BioFunction class.
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file | enrichment-algorithm.C |
| Implement the LogHelper, FunctionalEnrichmentAlgorithm, RandomFunctionNetworkBasedEnrichmentAlgorithm, RandomUniverseNetworkBasedEnrichmentAlgorithm, HypergeometricAlgorithm, PAGEAlgorithm, GenGOAlgorithm, GroupHypAlgorithm, EdgeGroupHyp, FuncAssociate, SetCoverEnrichment, and FunctionalEnrichmentAlgorithmDispatcher classes defined in enrichment-algorithm.h.
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file | enrichment-algorithm.h [code] |
| Define the LogHelper, FunctionalEnrichmentAlgorithm, RandomFunctionNetworkBasedEnrichmentAlgorithm, RandomUniverseNetworkBasedEnrichmentAlgorithm, HypergeometricAlgorithm, PAGEAlgorithm, GenGOAlgorithm, GroupHypAlgorithm, EdgeGroupHyp, FuncAssociate, SetCoverEnrichment, and FunctionalEnrichmentAlgorithmDispatcher classes.
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file | GO.C |
| Implement the GOFunction and GeneOntology classes defined in GO.h.
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file | GO.h [code] |
| Define the GOFunction and GeneOntology classes.
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file | old-annotations.C |
| Implement the GOEvidenceCodes and MyAnnotations classes defined in old-annotations.h.
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file | old-annotations.h [code] |
| Define the GOEvidenceCodes and MyAnnotations classes.
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file | setTemplates.cpp |
| Implement various template functions for manipulating sets.
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