FunctionalEnrichmentAlgorithmDispatcher Class Reference

Has methods for dispatching functional enrichment algorithms. More...

#include <enrichment-algorithm.h>

List of all members.

Public Types
enum	FunctionalEnrichmentAlgorithmType {   NO_ALGORITHM, FUNCASSOCIATE, GENGO, GROUP_HYP,   EDGE_GROUP_HYP, HYPERGEOMETRIC, PAGE, RANDOM_FUNCTION,   RANDOM_UNIVERSE, SET_COVER, MAX_ALGORITHM }
Static Public Member Functions
static FunctionalEnrichmentAlgorithm *	getFunctionalEnrichmentAlgorithm (unsigned int algorithmType, const set< MyNodeId > &clusterSet, const MyGraph &clusterNet, const MyPointSet &clusterPoints, const set< MyNodeId > &universeSet, const MyGraph &universeNet, const MyPointSet &universePoints, MyAnnotations &annotations, const GeneOntology &go, string category, unsigned int numRandomNets, unsigned int numRandomizationIterations, double genGOp, double genGOq, double genGOpenalty, string outfile)

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Detailed Description

Has methods for dispatching functional enrichment algorithms.

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The documentation for this class was generated from the following files:

• /home/poirel/src/c++/biorithm/libfun/enrichment-algorithm.h
• /home/poirel/src/c++/biorithm/libfun/enrichment-algorithm.C