- i -

• ImprovedBounder() : ImprovedBounder
• initialise() : TreeDecomposition::TreeWidthNodeSelectorMinDegree , TreeDecomposition::TreeWidthNodeSelectorMinFillIn , TreeDecomposition::TreeWidthNodeSelector
• initialiseAlgorithm() : MyReallyAbstractGainAlgo , MyOneVersusAllSemiHierarchicalHopfieldGainAlgo
• initialiseNodeStates() : MyOneVersusAllGainAlgo , MyOneVersusNoneGainAlgo , MyOneVersusAllSemiHierarchicalHopfieldGainAlgo , MyOneVersusAllSinkSourceGainAlgo , MyOneVersusNoneSinkSourceGainAlgo , MyOneVersusAllGeneManiaGainAlgo
• insert() : MyHistogram , MySetOfPointSets
• insertBack() : Itemset
• InsertEnrich() : Enrichment< S, T >
• insertFront() : Itemset
• isAlias() : motifDataset
• isAncestor() : GOFunction
• isAnnotatedWithFunction() : MyAnnotations
• isAnnotatedWithFunctionExperimentally() : MyAnnotations
• isChild() : DAGNode< NodeInfo > , GOFunction , DAGNode< NodeInfo >
• isClosestExperimentallyAnnotatedFunctionInitialised() : PredictionEvaluation
• isClosestFunctionInitialised() : PredictionEvaluation
• isConnected() : MyGraph
• isDescendant() : GOFunction
• isDone() : MySimulatedAnnealer< AnnealState >
• isEdge() : MyGraph
• isEdgeValid() : MyGraph
• isEmpty() : GenericLattice , Itemset , PosLattice , Rotor
• isExperimental() : GOEvidenceCodes
• isExperimentallyVerified() : PredictionEvaluation
• isHiddenNode() : MyGraph
• isInduced() : MyGraph
• isNode() : MyGraph
• isNotKnownToBeAnnotatedWithFunction() : MyAnnotations
• isNotKnownToBeAnnotatedWithFunctionSansTruePathRule() : MyAnnotations
• isObsolete() : GOFunction
• isOpen() : TruthMatrix , BinaryMatrix
• isPair() : Enrichment< S, T >
• isParent() : DAGNode< NodeInfo > , GOFunction , DAGNode< NodeInfo >
• isPoint() : MyPointSet
• isProbe() : readfile , motifDataset
• isUnknownFunction() : MyAnnotations
• isValid() : Rotor
• isValidEdge() : MyGraph
• isVerified() : PredictionEvaluation
• isVisibleNode() : MyGraph
• Itemset() : Itemset
• itemset() : itemset